>PF05975 (382 residues) KRLWKERFGKTSKELSRYLRYIFNGHIVIVMVFLLGTAAYYYQEWLKTLPEQFPAAPVMA LILAILLTYSPIYTFLSEADKVFLLPLENRLSGYFKRSMAVSFLVHAYLLIVGLGIFMPM YALVNEGDFQAFLPFLLILLALKAVNLLIRWKIQYYVDTNVHLLDAFVRYAVNAVFLYLL FSGASPIFTLAVGVLLVVLYWYFSMKSKNKALKWEFLIDQEERRMTSFYRLANMFTDVPK LRDRVKRRKWLDWLLASIPFKQEETFKNLFIRTFLRSGDYLGLFIRLTIIGGGAIYLISF GIGQVLLVLLFMYLTGFQLLPLWNHYQNKLWVKLYPVQEKLKEKSFRQLLSGILYLQSFL LSIAVLAKGDWLASLLSLAAGI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KRLWKERFGKTSKELSRYLRYIFNGHIVIVMVFLLGTAAYYYQEWLKTLPEQFPAAPVMALILAILLTYSPIYTFLSEADKVFLLPLENRLSGYFKRSMAVSFLVHAYLLIVGLGIFMPMYALVNEGDFQAFLPFLLILLALKAVNLLIRWKIQYYVDTNVHLLDAFVRYAVNAVFLYLLFSGASPIFTLAVGVLLVVLYWYFSMKSKNKALKWEFLIDQEERRMTSFYRLANMFTDVPKLRDRVKRRKWLDWLLASIPFKQEETFKNLFIRTFLRSGDYLGLFIRLTIIGGGAIYLISFGIGQVLLVLLFMYLTGFQLLPLWNHYQNKLWVKLYPVQEKLKEKSFRQLLSGILYLQSFLLSIAVLAKGDWLASLLSLAAGI | |||||||||||||||||||
1 | 6fv6A | 0.08 | 0.08 | 3.05 | 1.35 | SPARKS-K | -----------------IKKVVKLSIPIIVVNLLYTVENMISMILVSSISPSAVAATGFSLSLLWFIY-SLMALSYSGTNILIAQFVGDP-----SPILINGLFLSFLISLPLFFYGKDFVLFLMKVRSLAKEYLTPIFWPIGFLTNTFYGAYNGAGDTKTPMKVAIIMNLTHIGTAYTLINLGVEGAGWGIAISEILAFFIYTFLLIFFLEKMVRLGTPTALERAITTLSFNVFVGFAKFGDKLAAHQIGLRIESISF----MIGFGVMIASTTLAGQNYGAVNTSAHFTALVMSLTGLILILFEVIEWASYYLQIVGISQPAMAYASIYSGALKGKTHIPLFVNISSFWLFRIIPSYFLLVPWGFMTFETAVRALFYYTV | |||||||||||||
2 | 5t77A | 0.09 | 0.08 | 3.03 | 1.44 | FFAS-3D | --LFSSILFSIATFFSRILGLFR--DVLFAKYFGVSYELDAYF-----------IAIMFPFFLRKVFGEGAMSSAF---VPLYSEKSGEEKDKFLSSVINGFSLIILALVILSYFLIINLFGAGSSHETKILAKKLLLIIYFIFLWAISYSILNTNNKFFWPALTPSISNITIIIGTFLSTKYGIISPTIGFLIGSILMFFSIIKSIIKHKYYFPHFLKLFQYASRFYLLPYGLFAVS--------VSTVVLSKISNDRKNFNYHLNDALKTTLF---FTIPSMVGLIFLSTPIIRFFYELITSKILIAYTLGLPFYGIYSTISR-----SYHAIKNTKTPFIAATIVSLSNIILDIIFGIGVALATSIAGIIGVLYLLFSV | |||||||||||||
3 | 6cc4A | 0.11 | 0.10 | 3.76 | 1.03 | MUSTER | VKEAQAAAEQLKTTRNAYIQKYLKSLAAVSSMMFSRVLGFARDAIVARIAGMATDAFFVAFKLPNLLRRIFAEGAFSQA-FVPILQGEDATRVFVSYVSGLLTLALAVVTVAGMLAAPWVIMVTAPGLTSQLLKITFPYILLISLASLVGAILNTWNRFSIPAFAPTLLNISMIGFALFAAPPPVLALAWAVTVGGVLQLVYQLPHLKKIGMLVLPRINFHDAGAMRVVKQMGPAI------------VSVSQISL--------IINTIFASFL--ASGWMYYADRLMEFPSGVLGVA-LMDWGLRLCFLLALPSAVALGILSGPLTVSLFQY-FTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSIKTPVKIAIVTLI | |||||||||||||
4 | 5y50A | 0.10 | 0.10 | 3.55 | 1.53 | CNFpred | -------FLRETKKLSYIAGAMIAVNSSMYVLQVISIMMVGFLSSTAIA---VSFCSVTGFSVVFGLASALETLCGQ----ANGAKQYEKLGVHTYTGIVSLFLV-CIPLSLLWTYIGDILSLIG-QEAGKFATWLIPALFGYATLQPLVRFFQAQSLILPLVMSSVSSLCIHIVLCWSLVLGAAIAIGVSYWLNVTVLGLYMTFSSSKSRATISMSLFEGMGEFFRFSASMICLEWWS--------FEFLVLLSGILP--NPKLEASVLSVCLSTQSSLYQIPESLGAAASTRVANELPKQARMAVYTAMVITGVESIMVGAIVFGANVFGYLFSSETEVVDYVMAPLLSLSVIFDALHAALSGVARGRQDIGAYVNLAAY | |||||||||||||
5 | 3vvnA | 0.10 | 0.09 | 3.51 | 1.22 | Neff-PPAS | ----KTTKGVQLLRGDPKKAIVRLSIPMMIGMSVQTLYNLADGIWVSGLGPESVFMGIIALAAGLGVGTSSAIARRIGAR------DKEGADNVAVHSLILSLILGVTITITMLPAIDSLFRSMGAELAIEYARVLLAGAFIIVFNNVGNGILRGEGDANRAMLAMVLGSGLNIVLDPIFIYVGAAYATLLSMVVTSLFIAYWLFVKRDTYVDITLDFSPSREILKDILRVGLPSSLSQLSMSIA--MFFLNSVAITAGGENGVAVFTSAWRITMLGI-VPILGMAAATTSVTGAAYGEKLETAYLYAIKIAFMIELAVVAFIMLFAPQVAYLFTAQVIKGDLISALRTLPVFLVLTPFGMMTSAMFQGIGEGEKSLILTIF | |||||||||||||
6 | 6eznF1 | 0.11 | 0.10 | 3.65 | 1.27 | PROSPECTOR2 | SCVLSVFQTILKLFNYRATKYLVNNSFYKFLPGLMTTSAFIWHALRNWLGLPIDIRNVCVLFAPLFSG---VTAWA-----TYEF-----TKEIKDA--------SAGLLAAGFIAIVPGYISRSVAAIAITLLMVTFMFWIKAQHATCAALFYFYMVSAWGGYVFITNLIPLHVFLLILMGRYSSKLYSAYTTWYAIGTVAVGFLPIRSNDHMAALGVFGLIQIVAFGDFVKGQISTAKFKVIMQPVSWPAFFFDTHFLI---WLFPAGVFLLFLDLKDEHVFVIAYSVLCSYFAGVMVRLM-LTLTPVICVSAAVALSKIFDIYLDF------KIKPAALLAKLIVSGSFIFYLYLFVFHSTWVTR----------TAYS | |||||||||||||
7 | 6cc4A | 0.10 | 0.09 | 3.47 | 1.32 | SPARKS-K | VKEAQAAAEQLKTTRNAYIQKYLK-SLAAVSSMFSRVLGFARDAIVARIAGMATDAFFVAFKLPNLLRRIFAEGAFSQAFVPILAEYKSATRVFVSYVSGLLTLALAVVTVAGMLVIMVTAPGFADTAALTSQLLKITFPYILLISLASLVGAILNTWNRFS-IPAFAPTLLNISMIGFALFAPVLALAWAVTVGGVLQLVYQLPHLKKIGMLVLPAILGVSVSQISLIINTIFASFLAS--------------------------GSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKSFALMDWGLRLCFLLALPSAVALGILSGPLTVSLFQYGKLMTQRALIAYSVGLIGLIVVKVLAPGFYSIAIVTLILTQLMNL | |||||||||||||
8 | 6idpA | 0.12 | 0.10 | 3.71 | 1.42 | FFAS-3D | -QTSTSSLAK------QLFQMTW---PMLFGVLSLMSFQLVDSAFIGQLGVGFTMPIQMVIIGIQVGLGIATTAVISRA---IGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLLRQPLLGL-LGAPIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIFTAAIATIIAFGVGIAIVAPKVAQRYQWQDLNISQSLTALGHIMGPAMLSQLL-----------------------------PPLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIFVLGFQLLIALVTYVFATPLAELMTSETEVSQILNLHLISLGALGICMLMVSVANALGKSYVALTISALR- | |||||||||||||
9 | 3rceA | 0.11 | 0.10 | 3.61 | 1.02 | MUSTER | YEFFFN-TTNDGYAFAEGARDMIAGFHQ--SLSTLTYWLYSFESIILYMSTFFASLIVVPIILIAREYKLTTYGFI----LLGSI-----ANSYYNRTMSGYYDTDMLVLVLPMLILLTFIRLTINKDIFTLLLSPIFIMIYLWWYPSSYSLNFAM---LFGLYTLVFHRKEKIFYLAIALMIIALSMLAWQYKLALIVLLFAIFAFKEEKINFYMIWALIFISISILHLS----FMYFNVNETIVNTIDPEVFMQRISSSVLVFILSFIGFILLCKDHKSMLLALPMLALGFMALRAGLRF-TIYAVPVMALGFGYFLYAFFNFLEKK--------QIKLSLRNKNILLILIAFFSISPALMHIYYYKSSTVFTSYEASIL | |||||||||||||
10 | 5gpjA | 0.07 | 0.07 | 2.81 | 1.52 | CNFpred | KIATYANARTTLEGVGKAFITAFRSGAVMGFLLAALVLYIAINLFKIYYG--DDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGHELTAMLYPLIVSSVGILVCLLTTLFATDEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNA--------YSPVQDVADSCRTGAATNVIFGLALGYKS-VIIPIFAIAISIFVSFTFAMYGIAVAALGMLSTIATGLAIDAYGPISDNAG-GIAEMAGMSHRIREDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |