Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | KRFRIGVEGATTDGREIQREWLVQMAASYNPTVYTALINLEHIKSYSPDSAFNRYGKVTALVAEEIQDGPLAGKMALYADIEPTDSLVALVKKGQKLFTSMEVSPKFADTGKAYLVGLAATDDPASLGTEMLAFSASAAHNPLANRKQNPENLFTAAEETQIELEEAQDEKPSLFARVTALFTKKEQTDDARFSDVHKAVELVATEQQNLSERTDKSLSDQDQRLSELESSLQEQQAAFAELQQQLSREDSRKDYRQRAPGGDAPAGTLTNC |
1 | 2iubG | 0.06 | 0.05 | 2.12 | 0.70 | SPARKS-K | | TPTWINITGIH------RTDVVQRVGEFFG-------IVLEDILNVHQRPKVEFFYVFIVLKMFTYDKNLHEESEQVSLILTKN------------CVLMFQEKIG-------------------DVFDPVRERIRYNR--GIIRKKRADYLLYSLIDALVDDYFVLLEKIDDEIDVLEEEVLERPEETVQRTHQLKRNLVELRKTIWPLREVLSSLYRETVPYFRDVYDHTIQIADTVETFRDIVSGLLDVYLSSVSNKTNEVMKVLTIIA |
2 | 3qneA1 | 0.13 | 0.03 | 1.15 | 0.71 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVELVDEIIAE--------YKEWVKLRFDLDEHNKKLNSVQKEIGKRFKDLIAEKEKLSNEKKEIIEKEAEADKNLRS------------------------ |
3 | 5mg8A | 0.11 | 0.09 | 3.29 | 0.34 | HHpred | | ----------------ATKRKL-DFMSSAWEDAYQTYQLLKEYESAFEAPAYGPIYMNLKCKEKGFAAEGFFRTDTFRTFIMSNYKLMDLTSKYTP--TIREFSSEFEPPGDGYVIDFLEGPEVLKIHQIPIAKRELP-PASVNLNDPVLKTYLAGSSIHLVFAYGDRETRRDPLP-SRSIYFSE-NVEMDLVKRKEEQLNAQLSQLENLQNEERK----LQEKVNEHESLLSRTNDILSTLRKE--------------------------- |
4 | 1st6A | 0.11 | 0.10 | 3.74 | 0.72 | MUSTER | | NEIIRVLQLTSWDEDAWASKDTEAMKRALA--LIDSKMNQAKGWLRDPNAPPGDAGE-QAIRQ----ILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKA---QQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNSEGEEHIRGIMSEARKEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNRAVANTRPVKAAVHQRWIDNPTVDDRGVGQAA |
5 | 4nbqA | 0.10 | 0.07 | 2.48 | 0.56 | CNFpred | | NEVQVIATVLSVD-SKVPTDIPAILGASA-------AIGLSGIPF---------NGSLGAARVGYRG---------GEYLLNPSLDELK----DSALDLVVAGTR-----DAVLMVESEAQELPESVMLGAVLHGHQA--------------------------------MQVAIQAIAEFIQEAGGAKWEWE--NTALEKWVVEKSEAPLKKAYQIQ-----EKTARQAQIQAIRDQLLADRAAEREGEENAVNE----------HELAVI |
6 | 3he5A | 0.11 | 0.02 | 0.67 | 0.45 | HHsearch-2 | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNLVAQLENEVASLENENET----LKKKNLHKKDLIAYLEKEIANLRKKIE------------------------- |
7 | 5cwqA | 0.11 | 0.10 | 3.43 | 0.84 | Neff-PPAS | | -------------------EELERESEEAERRLQEARKRSEEARERGDLKELAEALIEEARAVQELARVACERG--------NSEEAERASEKAQRVLEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQDSEVKRLAEEAEQLAREARRHVQECRGGWLEHHH-------------- |
8 | 3he5A | 0.11 | 0.02 | 0.67 | 0.42 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNLVAQLENEVASLENENET----LKKKNLHKKDLIAYLEKEIANLRKKIE------------------------- |
9 | 3a4lB | 0.09 | 0.07 | 2.69 | 0.65 | SP3 | | DIMLIILTGL--PGKNL-AKILSKNNIDV------IVLGSDLIRESFPVWKEKYEEFIKKSTYRLIDS-ALKNYWVIVDDTNYYRDLINIAKKYNKNYAIIYLKA------------------SLDVLIRRNIERGEKIPNEVIKKMYEKFDEPGKKYKWDEPFTTKDIDFNEIAKKLIEKSKEIPKFN-NISDKIDKETRKIVSEYIKSKKLDKDKIKEVVELRKEFLKKIKDADRVLKEFKDLLNSY----------------------- |
10 | 1zylA | 0.09 | 0.07 | 2.85 | 0.87 | PROSPECTOR2 | | S---------AFTFQTLHPDTIMDALFEHGIRVDSGLTPLN-----------SYENRVYQF------QDEDRRRFVVKFYRPERQFALQLVNDEVPVAAPVAFNGQTLHQGFYFAVGRQFEADNIDQMEAVGRYQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKALIAAVTAHWREDFTVDKAEQRMQLETIIRAMRLVYYLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEPPLQLTP------------MY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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