Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MDFPPSKVVADAVEAARAAAVAASEARCAVFVAEKEAKAAVQFAAIAVDKVEAVKASSNVDLVDFKYHVNIKNSLRYAIQEMRRQTKLLHSVQKLCSTIPEVQGGKIGKVRGHLEHVCKELDKTSIVCEEDLETKNPTWDLYDNPSVDDEHPLDDDELGDGYSTEDPELWEMVFEDFKWEEIKANVSFEEHYRVINYRFEEINDRNM |
1 | 4uosA | 0.13 | 0.12 | 4.00 | 0.80 | SPARKS-K | | ------------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEEVKKMLEKMIEEIKKMLAIVKEMLEKKEIKKMLENGED------------SEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVG-- |
2 | 6cq0A3 | 0.12 | 0.11 | 3.72 | 0.88 | FFAS-3D | | -KVHPRDLDGDASMAKAITGVVCYACRIASTLLLYQELMRKGIRWLIE---------------------LIKDDYNETVHKKTEVVITLDFCIRNIEKTVELG--EISDIHTKLLRLSSSQGTIETSLQDIDSRLSPGGSLADAWAHQEGTHPKDRNVEKLQVLLNTEIYYQFKKDLAYNEEQIKQKLYYHATKAMTHFTD------ |
3 | 6bfiA | 0.14 | 0.12 | 3.93 | 0.29 | HHpred | | -----PEGKRKLLDGARGVIN--GMSDLLMCADRSEVRKMVKVCRSVQEYLDVAKVIDVEDLATFLQNLAHAQMLKSELGTVREQIPILISSIRVCCLVIVKKDYVIQKLFIAIEEIIRVLQLTT--TFE------EEASA-ASLAHMFHQAQDALASG-DI-S--RSTLD------------AVRKCISEGRRVAAL--------- |
4 | 5vtlA | 0.11 | 0.11 | 3.83 | 0.79 | MUSTER | | NTVSHVSAACLFSEALHGIPFGVKVLKALAAANVSDASKAREGCQDAVRRAEDAFSSTPKEAV-----GRARAALKEAESAENAAKTALSDVEQYAANAPLLAAGKTAPIDDYLKSVAESAASTARRIARG---SLPNRGV-NSWVLKKAVEFGCEFFTGDICKILTDGMADLRAEYDQLEVRRASEARVAARAAESNARKAAEEAE |
5 | 2yfaA | 0.08 | 0.07 | 2.66 | 0.68 | CNFpred | | ENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMA---RPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAESSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFEN--------------------------------AVLAYRDAVRQFRDAITTSRAEMTVQGADIVKRSDALYQIQL |
6 | 1vt4I3 | 0.16 | 0.10 | 3.37 | 0.67 | HHsearch-2 | | ---------------------------------------------------------------------------EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFSHIGHHLKNIEHPERMTLFLDFRFLEQKIHDSTAWN-ASGSILNTLQQLKFYKPYCDNDPKYERLVNAILDLPKIEENLKYTDLLRIMAED-EAIFEEAH |
7 | 5vtlA | 0.08 | 0.08 | 3.20 | 0.84 | Neff-PPAS | | ---NTVSHVSAACLFSEALHGIPFGVKVLKALAAANVSDASKAREGCQDAVRRAEDAFSSTPKVEEAVGRARAALKEAESAENAAKTALSDVEQYAANAPLLAAGKTAPIDDYLKSVAED-NSAASTARRIARGCSLPNRGVNSWVLKKAVEFGCEFFTGDICKILTDGMADLRAEYDEAAVRRASEARVAARAAESNARKAAEEAE |
8 | 6etxB2 | 0.18 | 0.08 | 2.51 | 0.36 | HHsearch | | --------------------------------------SEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGT-----EVQVDDIKRVYSDESRSTQYMKEYQ------------DAFLFN---------------------------------------------------------------- |
9 | 3jywF | 0.20 | 0.17 | 5.57 | 0.70 | SP3 | | ---------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGLINKIPPKPRKVLQLLR-----LTRINS-GTFVKVTKAELLKLIEPYYSTIRQLVYKRGFG-KINKQRVPLSDNAIIEANLGKYGILSIDDLIHEIITVGPHFKQANN--FLWGVPRKFKHFIQG-GSFGNREEFINKKSM |
10 | 4e40A | 0.12 | 0.12 | 4.26 | 0.93 | PROSPECTOR2 | | GEIKVELEDSDDVAAACELRAQAVIRNATTEFSRKKSEDILAKGGAAVERASAAVDRVSGLDKTNETAQKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANGDASAVKVSNLLARAKESENQAAEECSESTNYDVTAKSLAAALDKLDNAVKTTFQSILTSLDDKDVKSVEQRAEELETALEKAERQLEKKV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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