>PF05867 (241 residues) QPKKISIKHREVDEGEMQKLLEKLKEKKAQPQIIQQPIINEKEQILMDRVVKKAYPLKYA KKSPLPLSTAEDDSDFFKPTVVNKKVSTPAVPEDETYDHAPKLSEVLKTPEKNVYTVIGV PFWAVSLEPEEEDMKGVDPPISVGSEHVEMYHDKKLNLKMPKNLKMVLDEWQPMSGLTKR DETNFHPHIIFSNTVRTLINVSGKANLPERRHNDDGEEATQAEENVSFSNDPNPKFVYDR S |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | QPKKISIKHREVDEGEMQKLLEKLKEKKAQPQIIQQPIINEKEQILMDRVVKKAYPLKYAKKSPLPLSTAEDDSDFFKPTVVNKKVSTPAVPEDETYDHAPKLSEVLKTPEKNVYTVIGVPFWAVSLEPEEEDMKGVDPPISVGSEHVEMYHDKKLNLKMPKNLKMVLDEWQPMSGLTKRDETNFHPHIIFSNTVRTLINVSGKANLPERRHNDDGEEATQAEENVSFSNDPNPKFVYDRS | |||||||||||||||||||
1 | 6buaA | 0.05 | 0.05 | 2.15 | 0.78 | SPARKS-K | QSKGRARTTEATADKEREKTIQQIYQYRKAHNDIAEYLKDRVLEKTEPELYEIKGHDALPRGEICYAYEIFLEPQ-----FESCEYTEHMYLNLQT--PRNYAILLRNKLPRLLF--SNQGKLHVRVANAPLEVIIQNSE---QLELLHQFHGIWHPFFVLDRRSKENSYLVPLILGAEQKCFDWE-------LMTNFRRLPQSHGSNVQQREQQPAPRPEDFEGKIVYANYDKPMLVTKV | |||||||||||||
2 | 1j5aK | 0.08 | 0.06 | 2.26 | 0.53 | FFAS-3D | -----ELPLPEVNSGVLHEVVTWQLASRRRGTAST------RTRAQVSKTGRKMYGQKNARHGDRSVPTFVGGGVAFGPKPRSYDYTLP----RQVRQLGLAMAIASRQEGGKLVAVDGF----DIADAKTKNFIDGTEKVLLVTDDENTRRAAR----NVSWVSVLPVAGVNVYDILRHDRLVIDAAAL--------------------------------------------------- | |||||||||||||
3 | 2pffB | 0.17 | 0.12 | 3.97 | 0.44 | HHpred | ----------------------------------------------MDAYSTRPL--TLSHGSLEHVLLVPT-ASFFIASQLQKIEPTEGFAADDEPGYVSSLVEPSKVGQFDCLTE----FENCYLEGDIHALQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLDLYQTYHVLVGETLSELIRTTLDAE----------KVFTQGLNILEWLENPSNTP----- | |||||||||||||
4 | 4uj8A | 0.10 | 0.10 | 3.50 | 0.66 | MUSTER | PVANYQIKVLDDGK---------IDKSATESPANNDVQL---KVYAVD--ANGNIVGDITNDVTITSEATDTNGVIVNASKSTANGDTVYVITDNGSKKVGKETLTVKLGTVTLGTVD---VEVIDTTLKATVVTKKADLIELDAADALAKLLANLDIKDQNGNPMVDSAATPNTNEKLQALKSVLSGIVSSDT--SVIGSVSNVDNLKDDASISGLAVKKAGTTLVFNKIAPIAITVKAP | |||||||||||||
5 | 2ejaA | 0.12 | 0.06 | 2.05 | 0.45 | CNFpred | -------------PKEYKRLMDILTET---------------VLAYLKEQIKAG----------DVVQIFDSWVNNLSLEDYGE-----------VYPYVNYLISEL-------KDFSDTPVIYFFR---------------GSSSFIDLAV--DYRAD-----ALSVDWSVDIPELFKIY------DKGFQGNLEPAVL----------------------------------------- | |||||||||||||
6 | 2pffB | 0.17 | 0.15 | 5.05 | 0.64 | HHsearch-2 | QFNKILPEPTEDDEPTTAELVGKFLGYVSSLVEPSKDTTLVKTKEITARIMKRPFDKKSNS-------------ALFRAVGEGNAQLVAIEELRDLYQTYHTLSELIRLDAEKVFTQLNILEWLENPSNTPD----KDYLLSIPISHYVVTAK-LLGFTPLKGATGHSQGLVTAVAIAET-----DSWESFFVSVRKAITLNLTLRKAKAPSGLDQSRIPFSERKLKFSNKDIQIPVYDTF | |||||||||||||
7 | 2tmaA | 0.11 | 0.10 | 3.79 | 1.33 | Neff-PPAS | --KKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGCAELEEEIKTVTNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKL-KYKAI | |||||||||||||
8 | 2lqtA | 0.12 | 0.02 | 0.89 | 0.32 | HHsearch | STRC--LDENNYDRKNCRRFWNSIMQRRKNGVKPFMPTAAERDEILRAVGN-MPY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
9 | 6fmlG | 0.05 | 0.05 | 2.46 | 0.64 | SP3 | REGTNVALGYSTRSLVEYRLPRLIWCDGGRLDKPGPGNLVAGFRSKYLNHMMNIWTRSSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLNIARVKYRELGLCRLEKAARPRASAPPIDSRSAVIERENIMFHPKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFTNITVPSMARFVTD | |||||||||||||
10 | 4ykeA1 | 0.07 | 0.07 | 2.88 | 0.89 | PROSPECTOR2 | TAGPDTIRDPIRKDDSWRTFDEIMQLARTKDDNKPSRKAMYQVMRSLRKNCLGMKPCELEFLSDPAEVFEGAFPHVNYYDPDINVSIPVFSIHDPSGDGHLCSLDLLQVAGLVNYFGRVPEADNIHVKPILLQKGKTKMSNVRDERIHRTFRDNKVRFYRPTGDWFNLQNHYA------HTPTGYLSENMLPDFLECLIDPKKNPETGFHSIATSLVPGEAVPKHLSITGKSFEVEKIPLR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |