Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | QPKKISIKHREVDEGEMQKLLEKLKEKKAQPQIIQQPIINEKEQILMDRVVKKAYPLKYAKKSPLPLSTAEDDSDFFKPTVVNKKVSTPAVPEDETYDHAPKLSEVLKTPEKNVYTVIGVPFWAVSLEPEEEDMKGVDPPISVGSEHVEMYHDKKLNLKMPKNLKMVLDEWQPMSGLTKRDETNFHPHIIFSNTVRTLINVSGKANLPERRHNDDGEEATQAEENVSFSNDPNPKFVYDRS |
1 | 6buaA | 0.05 | 0.05 | 2.15 | 0.78 | SPARKS-K | | QSKGRARTTEATADKEREKTIQQIYQYRKAHNDIAEYLKDRVLEKTEPELYEIKGHDALPRGEICYAYEIFLEPQ-----FESCEYTEHMYLNLQT--PRNYAILLRNKLPRLLF--SNQGKLHVRVANAPLEVIIQNSE---QLELLHQFHGIWHPFFVLDRRSKENSYLVPLILGAEQKCFDWE-------LMTNFRRLPQSHGSNVQQREQQPAPRPEDFEGKIVYANYDKPMLVTKV |
2 | 1j5aK | 0.08 | 0.06 | 2.26 | 0.53 | FFAS-3D | | -----ELPLPEVNSGVLHEVVTWQLASRRRGTAST------RTRAQVSKTGRKMYGQKNARHGDRSVPTFVGGGVAFGPKPRSYDYTLP----RQVRQLGLAMAIASRQEGGKLVAVDGF----DIADAKTKNFIDGTEKVLLVTDDENTRRAAR----NVSWVSVLPVAGVNVYDILRHDRLVIDAAAL--------------------------------------------------- |
3 | 2pffB | 0.17 | 0.12 | 3.97 | 0.44 | HHpred | | ----------------------------------------------MDAYSTRPL--TLSHGSLEHVLLVPT-ASFFIASQLQKIEPTEGFAADDEPGYVSSLVEPSKVGQFDCLTE----FENCYLEGDIHALQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLDLYQTYHVLVGETLSELIRTTLDAE----------KVFTQGLNILEWLENPSNTP----- |
4 | 4uj8A | 0.10 | 0.10 | 3.50 | 0.66 | MUSTER | | PVANYQIKVLDDGK---------IDKSATESPANNDVQL---KVYAVD--ANGNIVGDITNDVTITSEATDTNGVIVNASKSTANGDTVYVITDNGSKKVGKETLTVKLGTVTLGTVD---VEVIDTTLKATVVTKKADLIELDAADALAKLLANLDIKDQNGNPMVDSAATPNTNEKLQALKSVLSGIVSSDT--SVIGSVSNVDNLKDDASISGLAVKKAGTTLVFNKIAPIAITVKAP |
5 | 2ejaA | 0.12 | 0.06 | 2.05 | 0.45 | CNFpred | | -------------PKEYKRLMDILTET---------------VLAYLKEQIKAG----------DVVQIFDSWVNNLSLEDYGE-----------VYPYVNYLISEL-------KDFSDTPVIYFFR---------------GSSSFIDLAV--DYRAD-----ALSVDWSVDIPELFKIY------DKGFQGNLEPAVL----------------------------------------- |
6 | 2pffB | 0.17 | 0.15 | 5.05 | 0.64 | HHsearch-2 | | QFNKILPEPTEDDEPTTAELVGKFLGYVSSLVEPSKDTTLVKTKEITARIMKRPFDKKSNS-------------ALFRAVGEGNAQLVAIEELRDLYQTYHTLSELIRLDAEKVFTQLNILEWLENPSNTPD----KDYLLSIPISHYVVTAK-LLGFTPLKGATGHSQGLVTAVAIAET-----DSWESFFVSVRKAITLNLTLRKAKAPSGLDQSRIPFSERKLKFSNKDIQIPVYDTF |
7 | 2tmaA | 0.11 | 0.10 | 3.79 | 1.33 | Neff-PPAS | | --KKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGCAELEEEIKTVTNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKL-KYKAI |
8 | 2lqtA | 0.12 | 0.02 | 0.89 | 0.32 | HHsearch | | STRC--LDENNYDRKNCRRFWNSIMQRRKNGVKPFMPTAAERDEILRAVGN-MPY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
9 | 6fmlG | 0.05 | 0.05 | 2.46 | 0.64 | SP3 | | REGTNVALGYSTRSLVEYRLPRLIWCDGGRLDKPGPGNLVAGFRSKYLNHMMNIWTRSSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLNIARVKYRELGLCRLEKAARPRASAPPIDSRSAVIERENIMFHPKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFTNITVPSMARFVTD |
10 | 4ykeA1 | 0.07 | 0.07 | 2.88 | 0.89 | PROSPECTOR2 | | TAGPDTIRDPIRKDDSWRTFDEIMQLARTKDDNKPSRKAMYQVMRSLRKNCLGMKPCELEFLSDPAEVFEGAFPHVNYYDPDINVSIPVFSIHDPSGDGHLCSLDLLQVAGLVNYFGRVPEADNIHVKPILLQKGKTKMSNVRDERIHRTFRDNKVRFYRPTGDWFNLQNHYA------HTPTGYLSENMLPDFLECLIDPKKNPETGFHSIATSLVPGEAVPKHLSITGKSFEVEKIPLR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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