>PF05749 (267 residues) GLQPRADMAAPPTLPQPPCAHGQHYGHHHHQLPFLGHDGHHGGTLRVGQHYRNASDVLPG HWLQGGWGCYNLSDWHQGTHVCHTKHMDFWCVEHDRPPPATPTPLTTAANSTTAATPATA PAPCHAGLNDSCGGFLSGCGPMRLRHGADTRCGRLICGLSTTAQYPPTRFGCAMRWGLPP WELVVLTARPEDGWTCRGVPAHPGARCPELVSPMGRATCSPASALWLATANALSLDHALA AFVLLVPWVLIFMVCRRACRRRGAAAA |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | GLQPRADMAAPPTLPQPPCAHGQHYGHHHHQLPFLGHDGHHGGTLRVGQHYRNASDVLPGHWLQGGWGCYNLSDWHQGTHVCHTKHMDFWCVEHDRPPPATPTPLTTAANSTTAATPATAPAPCHAGLNDSCGGFLSGCGPMRLRHGADTRCGRLICGLSTTAQYPPTRFGCAMRWGLPPWELVVLTARPEDGWTCRGVPAHPGARCPELVSPMGRATCSPASALWLATANALSLDHALAAFVLLVPWVLIFMVCRRACRRRGAAAA | |||||||||||||||||||
1 | 4adgA2 | 0.15 | 0.09 | 2.92 | 1.07 | SPARKS-K | -------------------------------------------------------------------------DLEATGACICEIPTDVSCEGLGAWVPT--APCARIWNGTQRACTFWAVNAYSSGGYAQLASYFNPGGSYYKQYH--PTACE----VEPAFGHS-----DAACWGFPTDTVMSVFALASYV-----TPERPRLRLVDADDPLLRTAPGPGE-VWVTPVIGSQARKCGLHIRAGPYGHA----------------- | |||||||||||||
2 | 4adgA2 | 0.16 | 0.08 | 2.73 | 4.33 | HHpred | -------------------------------------------------------------------------DLEATGACICEIPTDVSCEGLGAWVPTAPCIWNGTQRAC----TFWAVNAYSSGGYAQLASYFNPGGSYYKQY--HPTACEVAFGHS-----------DAACWGFPTDTVMSVFALAS-----YVTPERPRLRLVDADDPLLRTAPGPGE-VWVTPV------------------------------------- | |||||||||||||
3 | 5mm2A | 0.09 | 0.09 | 3.43 | 1.09 | PROSPECTOR2 | SLPENAPNAVSNPQQFITPATALSAEEYNVHEALGETEELEKGNVPVDSVTSIPLDLATIYDFAWDGEQNAISQFQRFAHLIPKSAGGFYTITANLPTGPLLNGLVNTAAPILSGAAHAIGGNVVGGLADAVIDIGSNLLTPKEKEQPSANSSAISGDIPISRFVEMLKYVKENYQDNPVFPTLLVEPQNNAMTALKTIPLFDRTVVPTVKEATLADIVIPNHMLRDFLQNKRAFQSGTKQNVYFQQFLTVLITLNDIANKIERVKH | |||||||||||||
4 | 4adgA2 | 0.20 | 0.11 | 3.59 | 0.97 | MUSTER | -------------------------------------------------------------------------DLEATGACICEIPTDVSCEGLGAWVPTAPCIWNGTQR----ACTFWAVNAYSSGGYAQLASYFNPGGSYYKQY--HPTACEPAFGHS-----------DAACWGFPTDTVMSVFAL-----ASYVTPERPRLRLVDADDPLLRTAPGPGE-VWVTPARKCGL-HIRAG-----PY--------------GHA-- | |||||||||||||
5 | 4adgA2 | 0.18 | 0.09 | 3.06 | 5.21 | HHsearch-2 | -------------------------------------------------------------------------DLEATGACICEIPTDVSCEGLGAWVPTAPCIWNGTQRAC----TFWAVNAYSSGGYAQLASYFNPGGSYYKQY--HPTACEVAFGHS-----------DAACWGFPTDTVMSVFALAS-----YVTPERPRLRLVDADDPLLRTAPGPGE-VWVTPVRAGPYGHA----------------------------- | |||||||||||||
6 | 4adgA2 | 0.17 | 0.09 | 3.07 | 1.03 | Neff-PPAS | -------------------------------------------------------------------------DLEATGACICEIPTDVSCEGLGAWVPTAPC--ARIWNGTQRACTFWAVNAYSSGGYAQLASYFNPGGSYYKQY--HPTACEVEPAFGHS---------DAACWGFPTDTVMSVFALASYV-----TPERPRLRLVDADDPLLRTAPGPGEV-WVTPVI-------------------------------GSQAR | |||||||||||||
7 | 4k0mC | 0.12 | 0.08 | 2.94 | 1.07 | PROSPECTOR2 | KVYTIDEAARTAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLA---IAKGEKIKEAEEA-----------------------GADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------------------------------------AA | |||||||||||||
8 | 4adgA2 | 0.18 | 0.09 | 3.06 | 7.09 | HHsearch | -------------------------------------------------------------------------DLEATGACICEIPTDVSCEGLGAWVPTAPCIWNGTQRAC----TFWAVNAYSSGGYAQLASYFNPGGSYYKQY--HPTACEVAFGHS-----------DAACWGFPTDTVMSVFALAS-----YVTPERPRLRLVDADDPLLRTAPGPGE-VWVTPVIKCGLGHA----------------------------- | |||||||||||||
9 | 4uxeA | 0.11 | 0.11 | 3.89 | 1.02 | PROSPECTOR2 | PSQGSLTLTQQTNLSAPLVSSSTGEFGGSLAANRTFTIRNTGAPTSIVFEKGPASGANPAQSSIRVWGNQFGGGSDTTRYSQRNKDGNIAFNINGTVPININASGLNVNGTATFGRSVTANGEFISKSATAAGDQTGGFNGLRPAKGVTINSGGLTVNSRIRSQGTKTSDLYTRAPTSDTWSIDIEKTNEVTGLPYLERGEEVKSPGTLTQFGNTLDSLYQDWITYPTTPEART-----------TRWTRTWQKTKNSPSDIGALPS | |||||||||||||
10 | 4adgA2 | 0.16 | 0.08 | 2.61 | 1.32 | SAM | -------------------------------------------------------------------------DLEATGACICEIPTDVSCEGLGAWVPTAPCIWNGTQRAC----TFWAVNAYSSGGYAQLASYFNPGGSYYKQY--HPTACEVAFGHS-----------DAACWGFPTDTVMSVFALAS-----YVTPERPRLRLVDADDPLLRTAPGPGEVW------------------------------------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |