Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | VVPVVGLADDDVEQWRRALDSFLVHGKTADTIRKLSRLFKGDGHYGLLASLVIMQSAFGHSSKFRHKLSVMEVIQFSDKTAVTLYRKLKDHKHETGIEQVFWDCKQRLALLLENECGCVDCQRLASVLQRDRGVMRPPNLNPHQKHSQAATFLTWIYNQAVLNLNVAVLEDQIEVLFIKPDEFFDFAPDMRDELSLLTSCLHFCWLHFILKHYVHLELDVIQEHI |
1 | 5k7vA | 0.08 | 0.08 | 3.16 | 0.67 | SPARKS-K | | AESSKKSIEELARAAKAVAEAIEEIALATAAIQLIEALAKNLASELAKKAIEAIYRLADNHTTDTFMARAIAAIANLAVTAILAIAALASNTTEEFMARAISAIAELAKKAIEAIYRLADMAAAIEAIALLATLAILAIALLASNHTTEEFMAKAISAIAELAKKAIEAIYRLADNHTSPTYIEKAIEAIEKIARKAIKAIEMLAKKEKAKSAIDEIREKAKEAI |
2 | 4p1nA | 0.11 | 0.08 | 3.04 | 0.91 | FFAS-3D | | ---------ESLSAKAFVMYSF-----AEMKFSQILNLIPAPELKKLCMESLLLYLK------------SLTILASSMKLTSKWWYENESKNCTLKLNILVQWIRDRFNECLD------KAEFLRLKLHTLNQSEDPQ--VLDDPTIFVEKL---IYDRAL-----DISRNAARLEMEG---------NYNTCELAYATSLWM--LEILLKEMIRKYVSSIANRL |
3 | 2pffB | 0.15 | 0.14 | 4.64 | 0.36 | HHpred | | -VFTQGLNILENTPDKDQLAHYVVTAKLLGFTPGELRSYL-KGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPN---TSLPPSILEDSLENNEPMLSISNLVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVPPQSLY-GLNLTLRKAKAPSGLDQSRIPFSRKLKFSFLSPFHSHLLVPASDLIN--------KDLVKNNVSF----- |
4 | 5cwqA | 0.11 | 0.10 | 3.71 | 0.70 | MUSTER | | ELERES-AERRLQEARKRSEEARERGDLKELAEALIEEAR------AVQELARVACERGN---SEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACG-RASEKAQRVLEEARKVSEEAREQGDDEVLLALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGD-SEVKRLAEEAEQLAREARRHVQECR |
5 | 4c0oA | 0.10 | 0.08 | 3.15 | 0.81 | CNFpred | | -----------CRCLRFAVRCVGKAALLQPLVTQMVNVYHVHQHSCFLYLGSILVDEYGME---GCRQGLLDMLQALCIPTFQLLEQQGLQNHPDTVDDLFRLATRFIQRSPVTLLRSQVVIPILQWAIAS------TTLDHRDANCSVMRFLRDLIHTGVAN-DFELRKELIGQVMNQ---------LGQQLVSQLLHTCTLPDVAEVLWEIMQVDRPTFCRWL |
6 | 2pffB | 0.16 | 0.15 | 4.89 | 0.60 | HHsearch-2 | | ILPEPGFADDEPTTPAELVGKFSKVGQFDQVLNLCLRSYL-KGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAY---PNTSLPPSILEDSLENNEGMLSISNLVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVPPQSLYG-LNLTLRKAKAPSGLDQSRKLKFSNRFLPVASPFLLVPAS---DLI--------NKDLVKNNVSFIVDCI |
7 | 5cwqA | 0.10 | 0.09 | 3.47 | 0.78 | Neff-PPAS | | --------ERESEEAERRLQEARKRSEEARERGDLKELA--EALIEEARAVQELARVACERGNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCREEAERASEKAQRVKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGD-SEVKRLAEEAEQLAREARRHVQECR |
8 | 4fqnA | 0.12 | 0.04 | 1.40 | 0.49 | HHsearch | | TL-RTKLSSQEIQQFAALLHEYRNGASIHEFCINLRQLY-GDSRKFLLL---GLRPFIPEKDSQHFENFLETIGVK---------------D------------------------------------------------------------------------------------------------------------------------------------- |
9 | 1st6A | 0.11 | 0.11 | 3.87 | 0.60 | SP3 | | SWDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAIRQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARQGATPMAMQKAQQVSQGLDLLTAKV---ENAARKLEAMTNSKQAIAQNWLADPNGGSEGEEHIRGIMSEARKVAELCEEPKERDDILRSLGEISALTAKLSDLRRHKGDSPEARALAKQIATSLQNLQSKTNRAV |
10 | 4e40A | 0.12 | 0.11 | 3.93 | 0.89 | PROSPECTOR2 | | GEIKVELEDSDEFSRKKSEDILAKGGAAVERASAAVDRVSGLDKTNETAQKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGAT---EHAKGAKANGDASAVKVSNLLARASENQYVKEAAE------------ECSESTNYDVTAKSLAAALDKLPGVKEDNAVKTTFQSILTSLDNLDKDVKSVEQRAEELETALEKAERQLEKAEKAAEEAETESSKV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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