>PF05687 (145 residues) GGTRVPTWRERENNRRRERRRRAIAAKIYTGLRAYGNYNLPKHCDNNEVLKALCNEAGWV VEPDGTTYRRGCKPPPQARPDPMRSASASPCSSYQPSPRASYNPSPASSSFPSSGSSSHI TLGGGNNFIGGVEGSSLIPWLKNLS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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Seq | GGTRVPTWRERENNRRRERRRRAIAAKIYTGLRAYGNYNLPKHCDNNEVLKALCNEAGWVVEPDGTTYRRGCKPPPQARPDPMRSASASPCSSYQPSPRASYNPSPASSSFPSSGSSSHITLGGGNNFIGGVEGSSLIPWLKNLS | |||||||||||||||||||
1 | 6i2oA | 0.11 | 0.08 | 3.01 | 1.13 | SPARKS-K | -------HQDNARKSRIQSEHRELVSAIQSYIGAQDDPTNPSEIT----LAKLAPYMSKNAKNEDGIVNSLAKDKSGNSSTS--------------APGSAHQIDTTNHKLISTFTPSNGGQATVLTYDWSANGVNSN------- | |||||||||||||
2 | 5x2gA1 | 0.18 | 0.09 | 2.91 | 0.47 | FFAS-3D | GESLALPRRLARSARKRLARRKARLNHLKHLIANEFKLNLNELLSKQDFARVILHIA----------KRRGYDDIKNKEKG---------------------------------------------------------------- | |||||||||||||
3 | 3kgxB | 0.13 | 0.06 | 2.14 | 0.29 | HHpred | ------ALIAEQGLENCWRRHREATAHLHKHLQEMGLVTVPAGYNWRDIVSYVLDHFSIEISGGERVLRIGLLG----------------------------------------------------------------------- | |||||||||||||
4 | 6d4hA1 | 0.11 | 0.10 | 3.77 | 0.84 | MUSTER | RQWKLSGELITETGYMDQIIEYLYPCLIITPL---DCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELI | |||||||||||||
5 | 5a5tK | 0.15 | 0.06 | 1.85 | 0.39 | CNFpred | -----------------DSVRKFICHVVGITYQHIDRWLLAEMLLTDSQLKMWMSKYGWSADESGQIFI---------------------------------------------------------------------------- | |||||||||||||
6 | 4b4tT2 | 0.15 | 0.06 | 1.86 | 0.47 | HHsearch-2 | ------------TDILKSAIRDEIAKNTE---LSYDFLPLSNFFNNEKETEKFALERNWPIVNSKVYF----------------------------------------------------------------------------- | |||||||||||||
7 | 6i2oA | 0.09 | 0.07 | 2.63 | 0.87 | Neff-PPAS | -------HQDNARKSRIQSEHRELVSAIQSYIGAQDDPTNPSEITLAKLAPYMKNAKNEDGIVNSLAKDKSGNSSTSAPGSAHQIDTTNHKLISTFTPSNGGQATVLTYDWSANGVNSN-------------------------- | |||||||||||||
8 | 4b4tT2 | 0.15 | 0.06 | 1.86 | 0.42 | HHsearch | ------------TDILKSAIRDEIAKNTE---LSYDFLPLSNFFNNEKETEKFALERNWPIVNSKVYF----------------------------------------------------------------------------- | |||||||||||||
9 | 1jvrA | 0.09 | 0.08 | 3.12 | 0.84 | SP3 | SPTPIPK-------APRGLSTHHWLNFLQAAYRLQPGPSDFDFQQLRRFLKLALKTPIWLNPIDYSLLASLI-PKGYPGRVVEIINILVKNQVSPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPPPYVEPTTTQCF-------- | |||||||||||||
10 | 2mxxA | 0.13 | 0.13 | 4.54 | 0.78 | PROSPECTOR2 | MADEATDVNEYLAQHDGEIRAEAAADPAVVAAKAAHNYGEVKAAYEAAFNNAFNAVRNKYVQRFQATYNNATEQEGKTYIQGETRYLKRVGAANNQNPAAEDKGATTPASKEEAKKSEAAAKNAGKAAGKALPKTSAVKHHHHHH | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |