Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MITFFEKLSTFCHNLTPTECKVSVISFFLLAFLLMAHIWLSWFSNNQHCLRTMRHLEKLKIPYEFQYGWLGVKITIKSNVPNDEVTKKVSPIIKGEIEGKEEKKEGKGEIEGKEEKKEGKGEIEGKEEKKEVENGPRK |
1 | 3pntB | 0.08 | 0.07 | 2.56 | 0.78 | SPARKS-K | | KEVTVNDLKKYLIRIDISDPEVILEYGVYPAFIQLKANIEEALLESNYQAVQTLNAENLSLPFYLN-------------------RQSILANITKALKDAHIREAAHYK---LGEFAHYQDTLDVERTIETF------ |
2 | 3bk6A | 0.13 | 0.11 | 3.77 | 0.45 | FFAS-3D | | ---------KAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQLQRIDE----ATDPWGIKVTAVEIKDVELPAGMQKAMARQAEAERERRARITLAEAERQAAEKL---------REAAEIISEHPM- |
3 | 2ajtA1 | 0.14 | 0.08 | 2.70 | 0.30 | HHpred | | --------VVWLHTFSPAKMWINGLTMLNKP-LLQFHTWMDFMNLNQHGGREFGFGARMRQQHAVVTGHWQ----------DKQAHERIGSWMRQ------------------------------------------- |
4 | 1syxA | 0.17 | 0.14 | 4.77 | 0.70 | MUSTER | | MLPHLHNGWQVDQAILSEEDRVVVIRF-----------GHDW---DPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMELYKHIMIDLGTGNNNK-----INWAMEDKQEMVD-ETVYRGARKGRGLVVSPKD |
5 | 4ocuA | 0.12 | 0.05 | 1.80 | 0.53 | CNFpred | | FRAYTEGFVGELRSITAREAELLPFSGNLLTMECGMRFLADYLENLVRSRTQIKLVREME------------------------------------------------------------------------------ |
6 | 1vt4I3 | 0.23 | 0.20 | 6.13 | 0.91 | HHsearch-2 | | LIPYLDFYSHIGHHLKNIEHPLFRMVFLDFRF-LEQKIRHDSTAWNASILNTLQQL-KFYKP---------------YICDNDPKYERLVNAILDFLPKIEENLCSKTDLLRIAL----MAEDEAEEAHKQVQRGGGG |
7 | 3j7jM | 0.15 | 0.13 | 4.41 | 0.75 | Neff-PPAS | | -ELIHDLLTIFVSAK---------LASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENK------EISFDTQIGADDVEAFVIAVRTKMVYCKIDQTQRKVVVSGGGGGGGGGGGGGGGGGGGGGGGGGGG |
8 | 3erfA1 | 0.10 | 0.06 | 2.12 | 0.33 | HHsearch | | -------------------------------------MIIYDTPAGPYPARVRIALAEKNMLSSVQFVRI----NLWKGHKKPEFL-AKVPVLEL--DD--------GTLIAE------CTAITEYID--ALDGTPT- |
9 | 2aytA2 | 0.10 | 0.07 | 2.70 | 0.62 | SP3 | | QLSTLELLQV-------VDIPIEIWVF--------------VTTSCGYCPSAAVMAWDFALAND------YITSKVIDASENQDLAEQFQ--VVGVINKGVAEFVGAQPENAFLGYIMAVYEKLKREKEQAL------ |
10 | 2iieA | 0.16 | 0.16 | 5.30 | 0.64 | PROSPECTOR2 | | MASTKSELIERLATQSHIPAKTVMLEHMASTLAMSEYL-FDKLGLSKELVELFFEERALENGEQVKLSGFGNDLRDKNNPKTGEVTFRPGQKLKIEIRGYRAPRTGRNPKTGDKVELEGKYVPHGKELRDRANIYGGS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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