Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | YARFDGRATRSEYWLFVLVQWVLLVGVIAGLAAALPREAASAPFMVMGVATVLITLLLPNLAVTSRRLHDSGLSFAWWLISFIPLIGGFVNLVLMCLGGTRGGNQYGPDP |
1 | 5ezmA3 | 0.12 | 0.10 | 3.55 | 1.22 | SPARKS-K | | ---------SPRSWGKQLIGMAIVAACGLLASPVVATLNANSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGHETVGRPAS------- |
2 | 3mktA2 | 0.09 | 0.09 | 3.45 | 1.06 | Neff-PPAS | | LYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWLQKQSDDVQ |
3 | 5nl2A3 | 0.12 | 0.10 | 3.51 | 1.20 | SPARKS-K | | ---------RFPAYFTNLVSIIFMIAVTFAIVLGVIIYRISTAATAVIINLVVIILLDEVYGCIARWLTKIEVPRLTFKAFLLKFVNSYTPIFYVAFF------------ |
4 | 4pgrA | 0.11 | 0.08 | 2.95 | 0.83 | FFAS-3D | | --------------LSFLWSFLLVAVLALAVVGIFNIFSPLNSAAMMAYSVIGTIVFSLYILYDLNQIKHRHITEVMALSLYLDFINLFINLLRFF-------------- |
5 | 6hwhR | 0.17 | 0.05 | 1.79 | 0.24 | HHpred | | ---------------------------------------------------------------------------THGLIGGVPLVLFAVLALIFLTRKGPHPDTYKMSD |
6 | 6ftg51 | 0.13 | 0.13 | 4.39 | 0.95 | MUSTER | | VLMLTGRFSHRIYVAYCTVYCLGTILSMQISFVGFQPVLSSEHMAAFGVFGLCQIHAFVDYLR-----SKLNPQQFEVLFRSVISLVGFVLLTVGALLMLIIASVSEHQP |
7 | 6f34A | 0.14 | 0.11 | 3.74 | 0.91 | CNFpred | | ------------DLTMLGIGAIIGTGIFVLTGVAAAEHAGPALVLSFILSGLACVFAALCYAEFASTVPVSGSAYTYSYATFGELIAWILGWDLILEYG----------- |
8 | 6hwhR | 0.21 | 0.07 | 2.31 | 0.52 | HHsearch-2 | | ------------------------------------------------------------------------MSTALTLIGGVPLVLFAVLALIFLTRKGPHPDTYKMSD |
9 | 6a2jA3 | 0.11 | 0.11 | 3.91 | 1.01 | Neff-PPAS | | PLQIGKKMQFHMIGILIYSYIVVLLLFVWIIVAAVHAITSYKDQKQIFWGWISCLIFITLQALSGIMIVYSELALGFALAHSFFIACLFGVLCYFLLLIARFRYES---- |
10 | 6hwhR | 0.19 | 0.06 | 2.05 | 0.34 | HHsearch | | ------------------------------------------------------------------------MSTTHGLIGGVPLVLFAVLALIFLTRKGPHPDTYKMS- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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