Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | KDGSSWMGEVEKYSRQIWLAGLGAYSKISNDGSKLFETLVKDGEKAEKLTKVEAQKQLDDVKNTSKSAKSRVDDVKDLAVGKWNELEEAFDKRLNGAIARLGVPSRSEVQALNSKVDQLTRQIELL |
1 | 4tqlA1 | 0.13 | 0.13 | 4.40 | 0.96 | SPARKS-K | | KQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKELLEKIK----KNIDDLKKIAEDLIKKAEEN |
2 | 4wheA | 0.10 | 0.09 | 3.27 | 1.13 | FFAS-3D | | ---NALLEDPQKLVRLM----IQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKTLVDDTLARM----KKEIGELENKLSETRARQQAL |
3 | 4oydB | 0.11 | 0.09 | 3.12 | 0.31 | HHpred | | ---------------------KKVLDKAKDQAENRVRELKQKLEELYKEARKLDQEMRRKLELRYIAALMAIGDIYNAIRQAKQE---------ADKLKKAGLVNSQQLDELKRRLEELKEEASRK |
4 | 4tqlA | 0.13 | 0.13 | 4.40 | 0.85 | MUSTER | | DRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGGKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKM----EKLLKQLKEEMKKMKEKMEKL |
5 | 4tqlA | 0.13 | 0.13 | 4.43 | 0.61 | CNFpred | | EKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKQLKEEMKKMKEKMEKLLKEMKQR |
6 | 3okqA | 0.12 | 0.06 | 2.25 | 0.35 | HHsearch-2 | | -----------------------------------------------SSNRMYMEKSQTE-----------LGDLSDTLLSKVDDLQDVIEIMRKDVAERRSQPAKKKLETVSKDLENAQADVLKL |
7 | 3na7A1 | 0.12 | 0.11 | 3.96 | 0.90 | Neff-PPAS | | ----EPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIK-RKSEKQEDLKKEMLELEKLALEL |
8 | 1lq7A | 0.20 | 0.10 | 3.31 | 0.61 | HHsearch | | -----------------------------------------GSRV------KALEEKVKALEEKVKALGG---------GGRIEELKKKWEE-LKKKIEELGGG--GEVKKVEEEVKKLEEEIKK- |
9 | 5cwmA2 | 0.15 | 0.13 | 4.52 | 0.78 | SP3 | | --DPEVALRAVELVVRVAELLLRIAKESGS--EEALERALRVAEEAARLAKRVLELAEKQGPEVARRAVELVKRVAELLERIARESGS---EEAKERAERV----REEARELQERVKELRER---- |
10 | 4tqlA1 | 0.12 | 0.12 | 4.21 | 0.71 | PROSPECTOR2 | | YKQVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKELLEKIKKNIEENIKEAKKIAEQLVKRAKQL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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