Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MIFTLDMVLNHLTQIFKGFKAYATENNFECDIINTYNHPYLSKITAASSNIIALKFDGTENLFDHNSRAGAFYENALEFSLNFQIYIIAIVLNAQDFDANSRMLMLYGMLSNFLHNKAHKYTLESQSQPEYISKVNFYIYPISNMQTVGLINLGTKYSNHAYSASIAFNASVKAIEILKE |
1 | 4wzzA1 | 0.11 | 0.09 | 3.42 | 0.65 | SPARKS-K | | AIIVKSAGNPYNQKESEGYKQVIEANGGKCVIQEPKSATCINNAISQGVDCIAIAANDTDALE----------PALTEAKIHVLSLRKVFVNQAFLWNPIQLGNLAAYASISLVNGTIQSFTVPDKTLGDN-----GSYKITAAADGGTEIILGAPFKFEPSNIAEWAKVY--------- |
2 | 4g23A3 | 0.09 | 0.07 | 2.52 | 0.54 | FFAS-3D | | --INPVETETFAASLFNQFQEWLERHGPFDAVIDGANGLVQQISPSKRLPLVILHKSRVNGGPATYPKNRALLEKWKNAGALYATYWLCLLVTNDERDHLFQLL-GNSFFPRWKEKHQVRISVTREDG----LKLN-------------------------------------------- |
3 | 2ioyA2 | 0.09 | 0.06 | 2.13 | 0.22 | HHpred | | -LVISTLNNPFFVTLKNGAEEKAKELGYKIIVEDSQNDSNVEDLIQQKVDVLLINPVDSDA-------VVTAIKEANSKNIPV----ITIDRSHIAQPALMG-SLGVEMADKYLKGEKIPNFIPAEL----------------------------------------------------- |
4 | 4wzzA1 | 0.12 | 0.11 | 3.72 | 0.66 | MUSTER | | IIVK-SAGNPYNQKESEGYKQVIEANGGKCVIQEPKSA-CINNAISQGVDCIAIAANDTDALEP-------ALTEAKNQGIHVLSLRKVFVNQAFLWNPIQLGNLAAYASISLVNGTI-------TGAADQSFTV-----PDKTLGDNGSYKIAAADGGTEIILGAPFKSNIA--EWAKV |
5 | 1apbA | 0.09 | 0.06 | 2.14 | 0.65 | CNFpred | | ---------PWFQTEWKFADKAGKDLGFEVIKIAVPTLNAIDSLAASGAKGFVICTPDPKLG-------SAIVAKARGYDMKVIAVDDQFVNAK-MMAATKIGERQGQELYKEMQKRG-----------WDVKESAVMAITAN------------------------------------- |
6 | 2x5cA | 0.21 | 0.04 | 1.23 | 0.41 | HHsearch-2 | | ILKELCEVKKDLEYVLKRYKEYEEEGGVKFCAE--------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 4wzzA1 | 0.11 | 0.09 | 3.38 | 0.68 | Neff-PPAS | | -----SAGNPYNQKESEGYKQVIEANGGKCVIQEPKSATCINNAISQGVDCIAIAANDTDA-------LEPALTEAKNQGIHVLSLDSATNAQAFLWNPIQLGNLAAYASISLVNGTITGAADQSFTVPDKTLGDNGSYKITAAADGGTEIILG------------------APFKFEPS |
8 | 1t6aA | 0.13 | 0.06 | 1.93 | 0.50 | HHsearch | | ----------------------------------------------------------------------------------ANTDLKKTTIDKQLLERYQA-LKKTGEQLGWAYQAAFPYTVRIHESV-------LYLQGDGRLYKG-AISVRT-------AGEETF---IDIALPPG- |
9 | 4wzzA1 | 0.10 | 0.09 | 3.26 | 0.80 | SP3 | | IIVK-SAGNPYNQKESEGYKQVIEANGGKCVIQEPKSATCINNAISQGVDCIAIAANDTDALE-------PALTEAKNQGIHVLSLRKVFVNQAFLWNPIQLGNLAAYASISLVNGTI-------TGAADQSFTV-----PDKTLGDNGSYKITAAADG------GTEIILGAPFKFEPS |
10 | 3rgaA | 0.08 | 0.08 | 3.25 | 0.60 | PROSPECTOR2 | | HMPAETVRKEVALEYCRRVNAPALRGAVHEETVTVGAPGAPPQRRGRTRVMGVIEVGESSWTARPAPDEERRKELAREHCLRIPRIRFEDPVGSWTRTGLEALRAHATMAVGSNVRETAGLTVAGQDGRHAAVTVSATMDYLPSLARHHLMTLPAPADPHRALIGIEYVMVIGVVSLLDP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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