Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | TAAGNDQAPQLPTKTVLGFTPPLPTLPQPTELVYTKRRRPKRRSRCRCLCFTMGMFAMGVLMTTTLLVSTFVLTVPMVALRTAPCPAQTFGLGDECVRPVSLDAYNSSNSSEIGAVCGAYSEMPAPDNTTVLIMNLLDCLNIGTNESAGEKLNLTDTPLANCNFSQNSVCSRKRVGVCYAARPLSPLGELIYKARQALRL |
1 | 3zhgA | 0.14 | 0.07 | 2.40 | 1.23 | SPARKS-K | | --------------------------------------------------------------------------------LCRLCPWDWTFLLGNCYFFS----KSQRNWNDAVTACKEVKAQLVIINSDEEQTFLQQTSKAKGPKKEATWLWVDGSTLSDCVEFAGDKCELKKFWICKKSATPC--------------- |
2 | 5ao5A | 0.13 | 0.10 | 3.45 | 1.80 | HHpred | | ---SDNS--PL---KYLNWESDQPDNPSEENCGVIRTE---SSGGWRDCSIAL----------------PYVCKKKP----KVECEPSWQPFQGHCYRLQAE----KRSWQESKKACLRGGGDLVSIHSMAELEFITKQIKQGLNDKLQMNFWSDGSLVSDCVTIWDSPCNQSLPSICKKAGQLS--------------- |
3 | 1yxkB | 0.17 | 0.09 | 2.81 | 0.90 | FFAS-3D | | -----------------------------------------------------------------------------VANCSAPCPQDWIWHGENCYL----FSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISPSYPWLWEDGSPLMPHLFRVRGAVSQTYCILAAFSICQKKANL---------------- |
4 | 5ugqA | 0.14 | 0.13 | 4.45 | 0.67 | MUSTER | | AGCPLGADPAKAVEVYHSLVDPLVDPDNPRISRPARTKDPRGLSYSDAIVGTIALYSPNLWQHLTDGLSELVDNRGDTLLALADYR------------RDSHGRYNNSGDARVAINCVDQPPVTDRDKVIDEDRRAREIAPFSYGKFTGDAPLGTCAFWPVPPTSQPHAVSAPGTVVVSTTHDPATPYKAGVDLANQLRG |
5 | 4qkgA | 0.16 | 0.07 | 2.34 | 0.99 | CNFpred | | ---------------------------------------------------------------------------------QAACPESWIGFQRKCFYFSD----DTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYK-------GPSDHWIGLSREGECAYLSSARCYTERKWICSKSD------------------ |
6 | 5ao5A | 0.13 | 0.10 | 3.48 | 0.80 | HHsearch-2 | | IGLNDLDNSPL---KYLNWESDQPDNPSEENCGVIRTE---SSGGWRDCSIAL----------------PYVCKKKP----KVECEPSWQPFQGHCYRLQAE----KRSWQESKKACLRGGGDLVSIHSMAELEFITKQIKQGLNDKLQMNFWSDGSLVSDCVTIWDSPCNQSLPSICKKAGQLS--------------- |
7 | 1e8iA | 0.11 | 0.06 | 1.97 | 1.14 | HHsearch | | ----------------------------------------------------------------------------------SSCSEDWVGYQRKCYFISTV----KRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREEKKEPGHPWWSNGKEFNKCVFLKSMECEKNLYWICNKPYK----------------- |
8 | 5xtsA4 | 0.13 | 0.07 | 2.42 | 1.04 | PROSPECTOR2 | | I--------------------------------------------------------------------------PSESDVPTHCPSQWWPYAGHCYKIHRDE---KKIQRDALTTCRKEGGDLTSIHTIEELDFIISQLGYEPNDIQMYFEWSDGTPVTDCVVMKGKDCEWPLGYICKMKS------------------ |
9 | 1sl6A | 0.12 | 0.06 | 2.13 | 1.11 | SAM | | ---------------------------------------------------------------------------TAFERLCRHCPKDWTFFQGNCYFMSNS----QRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNDLNQEGTWWVDGSPLSDCAEFSDNRCDVDNYWICKKP------------------- |
10 | 3vppA | 0.12 | 0.06 | 2.10 | 1.17 | SPARKS-K | | ----------------------------------------------------------------------------------SPCPNNWIQNRESCYYVS----EIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYSGRWLWQDGSSPSVCGYVKSNNCDTWKYFICEKYAL----------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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