Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MVSFSKNKVLSAAVFASVLLLDNNNSAFNNNLCSKNAKGLNLNKRLLHETQAHVDDAHHAHHVADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAAYAHHAHHAADAHHAHHASDAHHAADAHHAAYAHHAHHAADAHHAHHASDAHHAADAHHAAYAHHAHHAADAHHAADAHHATDAHHAHHAADARHATDAHHAAD |
1 | 4e40A | 0.13 | 0.13 | 4.57 | 1.03 | SPARKS-K | | VELEDSDDVAAACELRAQLAGVSIASGILLRPAVIRNASRKKSEDILAKGGAAVERASAAVDRETAQKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANGDASAVKVSNLLARAKESQYVKEAAEAKSLAAALDLPGVKEDNAVKTTFQSILTSLDNLDKDVKSVEQRAEELETALEKAERQLEKAEKAAEEAETES |
2 | 4ke2A | 0.24 | 0.22 | 6.89 | 1.09 | PROSPECTOR2 | | MNIDPAARAAAAAAASKAAV--------------------TAADAAAAAATIAASAASVAAATAADDAAASIATINAASAAAKSIAAAAAMAAKDTAAAAASAAAAAVASAAKALEKAAYAAATTANTAAAAAAATATTAAAAAAAKATIDNAAAAKAAAVATAVSDAAATAATAAAVAAATLEAAAAKAAATAVSAAAAAAAAAIAFAAAP |
3 | 5owvA | 0.05 | 0.05 | 2.25 | 1.03 | SPARKS-K | | SLQKSGMQEFENYLFNELY-----AGEKSKIALRAYKKEHLELKNILSEYEMQNRLIKENKQGVSEENQKLLLELQKQNTLLKEAQDEISNSIANLVLLLAKKLKERLIDEFKYLKIVDITTKDGINDILREIKFENIKKIEELKTKDDFDNGFEGFKDGISKNIDSIFQSEKFALLRLKIEELETNLDTVIFDTFKEFKMSEILNSLNING |
4 | 6djlB | 0.11 | 0.10 | 3.76 | 0.79 | FFAS-3D | | -------EKLNQSINRRETELEDARQKFRSVLVEATVKLDELVKKIVEDSKPYWEARRVARQAQEAQKATQDFQRATEVLRAAKETISLAEQRLLEDDKRQFDSAWQEMLNHATQRVMEAEQTKTRSELVHKETAARYNAAMGRMRQLEKKLKRAINKSKPYFELKAKYYVQLEQLKKTVDDLQAKLTLAKGEYKMALKNLEMISDEIHE-- |
5 | 4q5wA2 | 0.26 | 0.07 | 2.03 | 0.24 | HHpred | | SAIFEKNKALTLTTFDALLFVNKSASPPVVRLTTKDKRSLKIYEHLQKLVQAE--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 4ke2A | 0.24 | 0.22 | 6.76 | 0.98 | MUSTER | | --------------------MNIDPAARAAAAAAASKAAVTAADAAAAAATIAASAASVAAATAADDAAASIATINAASAAAKSIAAAAAMAAKDTAAAAASAAAAAVASAAKALETINVKAAYAAATTANTAAAAAAATATTAAAAAAAKATIDNAAAAKAAAVATAVSDAAATAATAAAVAAATLEAAAAKAAATAVSAAAAAAAAAIAF |
7 | 5nenA | 0.06 | 0.06 | 2.42 | 0.72 | CNFpred | | QVDSLRDQYYTTLATEGRLLAERGLSIVTFSPILDAVKDKPRVAEIIALQTQLFASRRQALQSEIDGYKQSMDGIRFQLKGLQDSRGNKQIQLSSLREQMNSMKQLAADGYLPRNRYLEVQRQFAEVNSSIDETVGRIGQLQKQLLESQQRIDQRFADYQREVRTQLAQTQMDASEFRNKLQMADFDLG----------------------- |
8 | 4b4tR4 | 0.17 | 0.03 | 0.93 | 0.39 | HHsearch-2 | | LFTLEKSKVIDSPELLSLISTTAAISSLTISLYAS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 2yfaA | 0.10 | 0.10 | 3.80 | 0.67 | Neff-PPAS | | MIANGDDTAAANTLAKLDAFSKQQAYLATTFKSPENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLER |
10 | 5o4uA | 0.13 | 0.09 | 3.11 | 0.46 | HHsearch | | LIVF-IAMVLVAAVAAAVLIQT----S---GYLQQKSQ------ATGRETTQEVASGIKVLSVVGKTDKTYVGDVFNASTALSNTNFGVLQDADNSVDQNYPT-L-NKGDIVV--I---------TVKV---GEGN-GV---------F-------GKGIPPRTK--ITGKV--I---------PEFGAPGVIE-FTTPS---TYTS-EVI- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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