Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MYQSLALAPNHGQSAYSHDSSNFLHSSASSPVYVPTTRVPSMLQTLPYLQGCETAHQSHPLGNHPGWAQTGAEASAFNPSSPHPSSGFPYSHSPPVSNNAGREGAYQSPLLLGSGAREQYSNALVRSVNGSYSSPYPAYVSPEMPPSWTAGHFESSVLHSLQTRQAALPGRRST |
1 | 5aftV | 0.08 | 0.07 | 2.95 | 1.13 | SPARKS-K | | ------SGNKVSRQSVLCGSQNIVLNGK---TIIM-NDCIIRGDLANVRVGRHCVVKSRSVIRPPFKKFSKGVAFFPLHIGDHVFIEEDCVVNAAQIGSYVHVGKNCVIGRRCVLKDCCKILDNTVLPPETVVPPFTVFSGCPGLFELPECTQELMIDVTKSYYQKFLPLTQV- |
2 | 4k0mC | 0.09 | 0.09 | 3.48 | 1.33 | MUSTER | | KFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
3 | 4k0mC | 0.09 | 0.09 | 3.48 | 1.93 | Neff-PPAS | | KFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
4 | 4k0mC | 0.08 | 0.08 | 3.16 | 1.27 | PROSPECTOR2 | | KVYTIDEAARTAKFDETVETVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA--AAAAAAAAAAAAAAA |
5 | 4btgA | 0.11 | 0.10 | 3.74 | 1.13 | SPARKS-K | | LRSNLALFIAYQDMVKQRGRAEVIFSDEELSSTIIPWFIEAMSEVSPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQR------FLDVEPGISDRMSATLA-PIGNTFAVSTAVYEA--VSQRGTVNSNGAEMTLGFPSRDYALDRDPMV |
6 | 6nyyA | 0.11 | 0.10 | 3.76 | 0.45 | FFAS-3D | | ---AKATAGEANVPFITVSGSEFLEPARVRDLFALARKNAPCILFIDQIDAVGRKRGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPL--KLDSTLEKDKLARKLASLTPG-FSGADVANVCNEAALIAARHLS |
7 | 6c72A | 0.23 | 0.17 | 5.22 | 0.26 | HHpred | | ------LRTVVQTATYKH--GTFWHSSDGSQVYLVPENVGAGVSNLKMLGS-RLGSTSSCISFTAKWVDTS----GFRSCSNHYFENCNFL-------DARRNTALVYCHDVT------FKN-----------CTF-QQLKPEL--TWVDTVYNVTVFNALASAGA-------- |
8 | 3pmqA3 | 0.05 | 0.04 | 1.97 | 0.98 | MUSTER | | ------VISNAKGDQQLNIHGARNDLAGQNPNMLADATATNPSMTSFDFKQLIHGLHSSQFAGFEDLNYPGNIGNCAQ--INDSTGISTVALPLNAAVQPLALNNGTFTSPIAAV-SSDATQNHMRQQGAVFAGTKADATAGTET--GQGTVADVLKVHPINKG---------- |
9 | 4txgA | 0.08 | 0.02 | 0.68 | 0.43 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------VNVMSYDLHGAWNRFVGPNAALYDDGKDAELAFWNVYS |
10 | 5o2rz | 0.57 | 0.05 | 1.32 | 0.55 | HHsearch-2 | | ------------------------------PVYIPRPRPPH-----PRL----------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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