Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | GNPKQKATNIAQKAAQEATAASEAQNAAGAAAAHQVKMQLAEKAMQAAKAAEAALAGKQQIVEQLEQEVREAEAVVQEEASSLDSAHSNVQAAIRASQQAQKQLKTLTEAVQTAQANVGNSEQAATGAQAELAEKAQLMEAAKTRVDQLLRQLSGARQDYSNTKQSAYRAACAAHEAKVNA |
1 | 5cwcA | 0.20 | 0.19 | 6.20 | 1.10 | SPARKS-K | | -SEKEELRERLVKICVENAKRKGDDTEEAREAAREAFELVREAAERASEVLELAIRLIKECVENAQREISEACRAAAEAFKRVAEAAKRAGITSS--EVLELAIRLIKECVENAQREISEACRAAAEAFKRVAEAAKRAETLKRAIEEIRKRVEEAQRESEACRQAAEEFRKKAEELKRR- |
2 | 2tmaA1 | 0.21 | 0.17 | 5.28 | 1.51 | FFAS-3D | | ----------------------------------AIKKKMKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKH-- |
3 | 6ewyA | 0.14 | 0.14 | 4.88 | 1.18 | MUSTER | | ALIADVAKANQRLQDLSDEVQAEQESVNKAMVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTFAAATYMNGPSPDEIIATVTAAKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVA |
4 | 6ewyA | 0.17 | 0.17 | 5.62 | 1.23 | Neff-PPAS | | -NQRLQDLSDEVQAEQESVNKAMVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTFAAATYMNGPSVSYLSASSPDEIIATVTAAKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVA |
5 | 6ewyA | 0.18 | 0.18 | 5.77 | 1.11 | PROSPECTOR2 | | DPQTDTIAALIADVAKANQRLQDLSDEVQAEQESVNKAMVDETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTFAAATDEIIATVTAAKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVA |
6 | 5cwpA | 0.17 | 0.17 | 5.48 | 1.06 | SPARKS-K | | EEEARELIERAKEAAERAQEAAERTKRLAQEAAEEVKREALKLIVEAIEAAVRALEAAERTDPEVRELARELVRLAVEAAEEVQRVNEALKLIVEAIEAAVRALEAAERTPEVRELARELVRLAVEAAEEVQREVNEALKKIVKAIQEAVESLREAEEKREKARERVREAVERAEEVQRDP |
7 | 5xg2A | 0.11 | 0.10 | 3.80 | 1.49 | FFAS-3D | | -----KGAIVRKEKLIEEIRAREEERNALVVRLGEIDRTFADTVVKELEEARKSLYEGEARIKRAEEEKERLKAEILTGEARLPGLRERAENLRRLVEEKRAEISELERRLSSITSQSFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGR- |
8 | 5nenA1 | 0.09 | 0.09 | 3.38 | 1.05 | MUSTER | | -QVQAQAQVDSLRDQYYTTLATEGRLLAERDGLSIVTPILDAVKPRVAEIIALQTQLFASRRQALQSEIDGYKQSMDGIRFQLKGLQDSRGNKQIQLSSLREQMNSMKQLAADPRNRYLEVQRQFAEVNSSIDETVGRIGQLQKQLLESQQRIDQRFADYQREVRTQLAQTQMDASEFRNK |
9 | 5nnvA | 0.12 | 0.12 | 4.13 | 1.07 | Neff-PPAS | | -AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESTSGEEKLEEAAKHK |
10 | 4ke2A | 0.25 | 0.25 | 7.86 | 1.07 | PROSPECTOR2 | | MNARAAAAAAASKAAVTAADAAAAAATIAASAASVAAATAADDAAASIATINAASAAAKSIAAAAAMAAKDTAAAAASAAAAAVASAAKAAAATTANTAAAAAAATATTAAAAAAAKATIDNAAAAKAAAVATAVSDAAATAATAAAVAAATLEAAAAKAAATAVSAAAAAAAAAIAFAAA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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