Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MADTDDIIDYESEDDMSEYEEEEDDEDNETKSLESSDVISLKQSNYKAELSTNLEEEVPQPGQSSKNVNSKILAIKKRYTRRISLLEITGIIAESYNLLQRGRLPLISNLSDETMKQKILHIVIQEIEEGTCPIIIEKNGELLSTNDFDKTGLKNHLDYIISIWKNQNRY |
1 | 1qklA | 0.17 | 0.12 | 4.04 | 1.26 | HHsearch-2 | | MSDNED--NFDGDDFDDVEEDEGLDDLENEEGQENVEILPS---GER-----------------------PQANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVELE-G---ETDPLLIAMKELKARKIPIIIRRDGEDWGVDELIITD------------------ |
2 | 1qklA | 0.17 | 0.12 | 4.04 | 1.31 | HHsearch | | MSDNED--NFDGDDFDDVEEDEGLDDLENEEGQENVEILPSG---ER-----------------------PQANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVELE-G---ETDPLLIAMKELKARKIPIIIRRDGEDWGVDELIITD------------------ |
3 | 5eqzA | 0.15 | 0.12 | 3.98 | 0.59 | SPARKS-K | | ------------HHHYVEEKKEIDSLMEDVLALVNDS--SGGKFKDYKDKINELKENLKDIGNAKEKLLNLQNSFQDKLAAKLAALKAAKNTIENI-----------TDKDQDISKRKIWSEAKLV---G---VTVPLLGS--NTSGNGDKMSKNAVEQIDKVIKFLEE- |
4 | 4k8vC2 | 0.11 | 0.07 | 2.52 | 0.70 | FFAS-3D | | --------------------------------------------------------ESSGAKCCRKECLKLMKYLLEQLKKEFCSYHVKTAIFHMWT-----QDPQDSQWDPRNLSSKLLAFFLECLRTEKLDHYFIPKFNLFSQELIDRKSKEFLSKKIEYERNN---- |
5 | 1qklA | 0.19 | 0.14 | 4.36 | 0.62 | HHpred | | MSDNED--NFDGDDFDD------VEEDEGLDDLENA--EEEGQENVEILPSGE--R--------------PQANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVEL-EG---ETDPLLIAMKELKARKIPIIIRRDGEDWGVDELII-------------------- |
6 | 1qklA | 0.20 | 0.14 | 4.51 | 0.84 | MUSTER | | MSDNED--NFDGDDFDDVEEDEGLDDLENAEEEG--------QENVEILPSGERPQANQKRITTPY----------------MTKYERARVLGTRALQIAMCAPVMV-ELEGET---DPLLIAMKELKARKIPIIIRRYGEDWGVDELD--------------------- |
7 | 5y5aA | 0.11 | 0.06 | 2.33 | 0.49 | CNFpred | | ----------------------------------------------------------------LKHFQTLFDKIEIRYIKNIMIFQDLILLIGSFHMYQMINGVSSN-IRSIQSETKFLEFIFKFFTHLIDKVIMKE------FKNCEMFQYLAMARIMMCWIKSHKNV |
8 | 4qiwK | 0.23 | 0.08 | 2.39 | 0.77 | HHsearch-2 | | --------------------------------------------------------------------------------FRYTRFEKARIIGARALQIAMGAPVLIDVP----EGITPLQAALLEFEKGVIPITVIRPS------------------------------ |
9 | 1xfuA3 | 0.10 | 0.09 | 3.27 | 0.70 | Neff-PPAS | | -PITKAKINTIPTSAEFIKNLSSIRRSSNVGVYKDSGDKDEFAKKESVKKIAGYLSDYYNSA---------NHIFSQEKKRKISIFRGIQAYNEIENVLKSKQIAPEYKNYFQYLKERITNQVQLLLTHQKSNIEFKLLYKQLNFTENETDNFEVFQKIID--------- |
10 | 6gykF | 0.14 | 0.06 | 2.21 | 0.76 | HHsearch | | -----------------------------------------------------------KAIPK----------DQRATTPYMTKYERARILGTRALQISMNAPVFVDLEG----ETDPLRIAMKELAEKKIPLVIRRDGSFWSVEELIVD------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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