Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MSYLSYYNMFSDFNAGAGVTDTELFTKEEEEAFLPKHDNITGEYNFGFPFKGSSFPNILMRNDIRALIGLILFVLAITTTPVIAVIMIAVASALLPFPSLVIAYCLSVQIINPGNNNATTMSIICVALAIIAIFINSISKTAYIITYIILAVLFCIYAFNLTRSSKNNMNVTRCPRDIRGGDKHSIEK |
1 | 5yz0A | 0.09 | 0.09 | 3.29 | 0.86 | SPARKS-K | | QELLSIYDCREMETNGPGHQLWRRFPEHVREILEPHLNTRYKSSQKSTDWSGVKKPIYLSKLGSNFAEWSASWAGYLITHDLASKIFTCCSIMMKHVTIYLLPHILVYVLLGCNQE--DQQEVYAEIMAVLKHDDDLCQLSTQTVFSMLDHLTQWARHKFQALKAEKDSMVSTVDYEDYQSVTRFLDL |
2 | 3jbrE | 0.12 | 0.06 | 2.09 | 0.81 | FFAS-3D | | ---------------------------------------------------------------FCILVGIVLAMTAVVSTTQKEYSISAAAISVFSLGFLIMGTICALMAFRKKRDYLLRPASMFYVFAGLCLFVSLEVACAAFVLLFLGGISLLLFS------------------------------ |
3 | 4umvA | 0.12 | 0.07 | 2.64 | 0.31 | HHpred | | ------------------------------------------------------------KENLPLITLIVMMAISWGLNHPFGQLAFIATTLVGLYPIARQALR---LIKS---GSYFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGWAASRARQGVMALKPETATR-LRNGEREEV-- |
4 | 6eznF | 0.10 | 0.10 | 3.55 | 0.82 | MUSTER | | ASMQIPFVGFLPIRSNDHMAALGVFGLIQIVAFGDFVKGQISTAKFKVIMQPVSWPAFFFDTHFLIWLFPAGVFLLFLKDEHVFVIAYSVLCSYFAGVMLMLTLTPVICVS-------AAVALSKIFDIYLDFKIKPAALLAKLIVSGSFIFYLYLFVFHSTWVTRTAYSSPSVVLPSQTKLALIDDF |
5 | 3rkoB | 0.03 | 0.02 | 1.02 | 0.87 | CNFpred | | ------------------------------------------------------LADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAAAIFHLMTHAFFKALLFLASGSVILA------------------------ |
6 | 4umvA | 0.12 | 0.08 | 2.80 | 0.56 | HHsearch-2 | | ------------------------------------------------------------KENLPLITLIVMMAISWGLNHPFGQLAFIATTLVGLYPIARQALRL---IKS---GSYFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGWAASRARQGVMALKPETATR-LRNGEREEVGR |
7 | 5t77A2 | 0.06 | 0.05 | 2.35 | 0.69 | Neff-PPAS | | NYHLNDALKTTLFFTIPSMVGLIFLSTPIIRFFYEHGAFTSKDTLITSKYTLGLPFYGIYSTISRSYHAIKNTKTPFIAATIVSLSNIILDIIFGLPIGVALATSIAGIIGVFPIKDFLKISLNSLIMLFVIYLTDFTDNEFWFLIQILIGILVYLIFSSIFYRDLIRRFL----------------- |
8 | 4umvA | 0.12 | 0.07 | 2.65 | 0.36 | HHsearch | | ------------------------------------------------------------KENLPLITLIVMMAISWGLNHPFGQLAFIATTLVGLYPIARQALR---LIKS---GSYFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGWAASRARQGVMALKPETATR-LRNGEREEVA- |
9 | 5xviA2 | 0.11 | 0.10 | 3.67 | 0.75 | SP3 | | ALKVI--------ELGGSLSDEGSFTPEEIELIAQVERKQLASIVGAAPFSDANKFKYIAGARPWVHVGKVVALPSISGEEAQVLINAGCKFIAMGCTQEAIDTFEAHRTANAGAAANAGGVAVSGLEMAQNSARLSWTEVDARLKDIMRDCFKNGLETAQEYATPAEGVLPS---LVTGSNIAGFTK |
10 | 1texA | 0.07 | 0.07 | 3.01 | 0.76 | PROSPECTOR2 | | DHSLRATGVAGEPQEFFQYLPNTSMSPQPREWFADEDQSILRLLDPLIEGKPDLAPATIWRDYIQNQTPLLVQRAKDLPDRSGSGLLSAIRDVVGSDVVSQAVSFWRAVQTRVWRRAEYHAGAIAHVITMLRAQEEGWRAWFTEVDYPYLWRNLTEVVGTVLEALGQDPRLAEWVERYRDQRD-GLPL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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