Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | KATVSYTLFLYREELRRTQSRFMRLNRTKISLTDKLITKSVRNLEKCSIEDLHAINREILFKKKLKYQMQRSKELEKLGLKNA |
1 | 5cwbA2 | 0.13 | 0.13 | 4.58 | 0.84 | SPARKS-K | | CECVARIVAEIVEALKRSGTSEDEIAEIVARVISEVIRTLKEVIKECVQRIVEEIVEALKREDEINEIVRRVKSEVERTLKES |
2 | 6nuwF | 0.19 | 0.17 | 5.46 | 0.77 | FFAS-3D | | --ALDSVFEKYEKEMNQDNNEVKRIYSKKERLLEIILTKIKKKLRQAKFPDIEYIYSKRQFQNRYSQELQNNERLEA------ |
3 | 3ucqA | 0.15 | 0.08 | 2.84 | 0.27 | HHpred | | -----------------------LGSMLKDVLTSELAAQVRDAFDD--------DRDAETFLLRLERYGEDLWESLRV----- |
4 | 2h7oA1 | 0.17 | 0.17 | 5.55 | 0.66 | MUSTER | | LSIVEPSLQRIQKHLDQTHSSDIGSLVRAHKHLETLLEVLVTLSQPVSSETYGFLNRLAEAKITLSQQLNTLQQQQESAKAQL |
5 | 5v5sA | 0.12 | 0.11 | 3.81 | 0.48 | CNFpred | | --SKWRALTLQEKAAGIQ---DVTYQTDQQTLILNTATAYFNVLN-----AIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAI |
6 | 1vt4I3 | 0.14 | 0.14 | 4.90 | 0.64 | HHsearch-2 | | PPYLDQYFYSHIHHLKNIEHERMTLFRMVFLDFRFLEQKIRHDSTNASGSILNTLQQLKFYKPKYERLVNILDFLPKIEENLI |
7 | 6msqA | 0.12 | 0.11 | 3.83 | 0.83 | Neff-PPAS | | --GSEYEIRKALEELKASTAELKRATASLRAITEELKKNPSEDALVEHNRAIVEHNAIIVENNRIIAAVLELIVRAI------ |
8 | 4wwrB | 0.13 | 0.07 | 2.51 | 0.40 | HHsearch | | -PQV-------WQLISKVLARHFSAADAS-RVLEQLQRDYERSLSRLTLDDIERL---------------------------- |
9 | 5j0kA | 0.22 | 0.19 | 6.08 | 0.81 | SP3 | | ----------TRTEIIRELERSLREQEELAKRLKELLRELERLQRESSDEDVRELLREIKELVEEIEKLAREQKYLVEELKRQ |
10 | 2vkjA | 0.11 | 0.11 | 3.88 | 0.49 | PROSPECTOR2 | | GSHMNYELYIFENYVKKEGLKIEGMELLKEKKARSLIAEGKDLFETANYGEALVFFEKALIKKIASFYLEECRKKLA----GD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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