Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MTNWATLWPNDRLFLSDTYQLIWFDIEADRIEHKHFKAQNSEDISMIPKGFVSFVDNRLPMCINHKGEVYIRVGSFDTAYYQKFGDLDVSDFDDQVLPPDRDFTFNKVVFGDVPQE |
1 | 1h2xA3 | 0.13 | 0.13 | 4.46 | 0.72 | SPARKS-K | | -EYDYVTNEGTVFTFSPNYRLINIDFDPEESKWKVLVPEHEKD---VLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGKIFPLEVGSVVGYSGQKKDTEIFYQFTSIIYHCDLTK |
2 | 4qoaA | 0.23 | 0.13 | 4.04 | 0.31 | FFAS-3D | | ---------------------IDFDKKGNWLEVDCKKSAVPEA--LIPVPVKEYVKANFPTKIERGRTGVIELGNDYSLKFNKKGKF----------------------------- |
3 | 3b2zF1 | 0.10 | 0.04 | 1.59 | 0.24 | HHpred | | -----------------------------------------------------------------SLSRFVETLVADDKMAAFHGA-GLKAFKHPSIRNPVSLVVTRLVILGSGEE |
4 | 1bmlC1 | 0.12 | 0.10 | 3.69 | 0.62 | MUSTER | | ------SVNNSQLVVS----VAGTVEGTNQDISLKFFEIDLTSRPHK-ADLLKAIQEQLIANVHSNDDYFEVIDFASDATITDNGKVFADKDGSVTLPPVQEFLLSHVRVRPYKE- |
5 | 3i1cA | 0.03 | 0.02 | 1.06 | 0.71 | CNFpred | | ------------IAVRHRPYQLIVAEQ-PTKKLWSYDIKGPAKIE-NKKVWGHIPG-GGAAGMDFDNNLLVANWGSSHIEVFGP-------------------------------- |
6 | 3l81A2 | 0.15 | 0.11 | 3.78 | 0.35 | HHsearch-2 | | ----------NEVFL-------------DVVERLSVLIASNGS------LLKVDVQGEIRLKSFLPSGSEMRIGLTEEFSVGKGIRVNLDEFELRLQPPQGELTVMRYQLSDDLPS |
7 | 1h2xA3 | 0.17 | 0.16 | 5.39 | 0.70 | Neff-PPAS | | --DYVTNEGTVFTFKTNNYRLINIDFTDP--EESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGI |
8 | 1rwiA1 | 0.08 | 0.05 | 2.01 | 0.18 | HHsearch | | VLPFVAVDSAGNVYVTSYGRVVKLAG---T------------TVLPFNG-----LYQPQGLAVDGAGTVYVTDF-NNRVV-----TLAAGSNNQTVL------------------- |
9 | 3hxjA2 | 0.12 | 0.10 | 3.67 | 0.61 | SP3 | | -SDFT--IFEDILYVTSDGHLYAINTDGTEKWRFKTKKAIYATPIVSE-------DGTI-YVGSNDNYLYAINPDGTEKWRFKTND---AITSAASIGKDGTIYFGKVYAINPDGT |
10 | 4nx9A2 | 0.08 | 0.08 | 3.03 | 0.49 | PROSPECTOR2 | | TYFKADGGGAVTAATASGTVDIAIDITGGSAVNVKVDKGNETAEQAAAKIAAAVNDANVGIGAFTDGQISYVSKASADGTTSAVSGVAITDTGSTGAGTAAG-------TTTFTEA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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