Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MTSGEAERLRLTHLDHCRRHKCFARGSGEFCYFELPEEHIEGPAHGVRLTTQVELTRSLIREFTKRPLLVERERGPCVLTVVCNCPNPGLHQDLCCHLCAEYNK |
1 | 2p1xA | 0.13 | 0.12 | 4.00 | 0.80 | SPARKS-K | | EFHRLADQLWLTIEERLDDW-----DGDSDIDCEINGGV-------LTITFENGSKIIINRQEPLHQVWLATKQGGYHFDLKWICDRSGETWDLLEQAATQQAG |
2 | 4esqA | 0.13 | 0.12 | 4.03 | 0.56 | FFAS-3D | | -TADKARAFSADKWKNCAGKTVTVTNKAKTYRWTFADVKGSPPTITVIDTQEGAEGWECQR--------AMSVANNVVVDVNCGYQITNQAGQIAAKIVDKVNK |
3 | 5xb7A2 | 0.08 | 0.06 | 2.28 | 0.22 | HHpred | | -----------------------------GVSLKCPDTLAGASANDFIEMLSPAETHVLAWYWDSYAAITRHAFGSGDAQWVGTQLQADAWRTVLAEALSNAGV |
4 | 1unqA | 0.08 | 0.08 | 3.00 | 0.79 | MUSTER | | MSDVAIVK-----HKRGEYIKFLLKNDGTFIGYKERPQDVEAPLNNFSVA---QCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADG |
5 | 4f1iA | 0.03 | 0.03 | 1.74 | 0.73 | CNFpred | | SLLTRMKAVAHIVKNVNPDILFLQEVV-LYKIYYSNKGC---QYYTAILVSKMFDVEKHDVIHFYRTLQILEGSIGLKVFLLNTHLERPQRCAQFGFCMDKVRE |
6 | 2yhgA | 0.14 | 0.08 | 2.64 | 0.45 | HHsearch-2 | | DPDG---------------------DSLNYSWSHYGEADSYSGSASANVQIPSGKDIHILLTDNGSPNLYAYRR--VVINVQ---------------------- |
7 | 1unqA | 0.08 | 0.07 | 2.66 | 0.78 | Neff-PPAS | | ---------------TWRPRYFLLKNDGTFIGYKRPQDVDQREAPLNNFSVAQ-CQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADG |
8 | 4p8iA2 | 0.18 | 0.12 | 3.75 | 0.47 | HHsearch | | --------------------YTETGHLGDCLYFKNPEFDPQKAAHGLGILNGKQIIDKLNSFALQSAYLLSQATRLDVP-------------SLFRIV-R---- |
9 | 1unqA | 0.07 | 0.07 | 2.82 | 0.70 | SP3 | | MSDVAIVHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADG |
10 | 5t86A | 0.08 | 0.08 | 2.99 | 0.44 | PROSPECTOR2 | | KPEKNWETARNKALDLVGNL------GADSKPVIGRLEVSAGNGKVIGRQSSDGKVGWRVDYDPEKGTHINIWDYGKAVKQVIPFEGN---EKSFETILKQLNR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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