Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | KKLLSILAVFGVSAVGTTSVVACNKTESNNLSRVKTIAAPATVAASTPKAVTKPEIKTALEANVLKAVQGVVKTATAADFQFEVYKNSKGTALETIDLEAGKVEVYLQITPAKDKTVVIGETRYIKVTLPKHGEVTKVDIKDVTVTEQTVGIKASTPKAVKKDELNAVNTYATLAKAVLDAIQNIAPNAGASDFEITNNGAEGDYEAAKEVEVTVKAKNDSANISGQFKFKAKVTATA |
1 | 4uj8A | 0.12 | 0.10 | 3.53 | 0.71 | SPARKS-K | | GKIDKSATESPANNDVQLKVYAVDANGN------IVGDITNDVTITSEAT-------------------------DTNGVIVNASKSTANGDTVYVITDNGVGKETLTVKLGTV------TLGTVDVEVIDTTLK----ATVVTKKADLIELDQNGNPMVDSAATPNTNEKLQALKSVLSGIVSSDTSVIGSVLKDDASISGLAVKKAGTVTLTLVFNEDSKI--APIAITVKAPA-- |
2 | 3qtaA | 0.13 | 0.08 | 2.91 | 0.63 | FFAS-3D | | ----------------------------------------------------KLTLITRLIQDGAEQVADSLATLAGVDAAVEI------KSLSFVQGGGTIYSARVRLTEPPYGVFLT--------------------FETETAAEIAELTGSSVEDGFTQLHESALQECNILTSGFIDGIANTLNATINGTPTVVQDSHVRRDSLTIVLDSLVDIKESDVAFSLRIFL-------- |
3 | 6ey4A | 0.11 | 0.09 | 3.22 | 0.30 | HHpred | | SDIKAALGTDK--------------KY-AGIIEVEKKDVSD-VKNKEGIKEKYLAYHKKTEADVYNSALGKAAVVLGEKVTGKVVLGRYDENTKPFQIVNGQ--AVISLTAGGGEQDINGQFTFLSGKYVVVPNSATISADKMNV--V--YRGVVNPISVSFAGVDANKIVASAPG-----L---SSAGKPGKYNMSPG-------QGTEATISVTGTNGD-KVTDKKTFRIKGIPG- |
4 | 4uj8A | 0.17 | 0.16 | 5.25 | 0.80 | MUSTER | | VA----VANYQIKVLDDGKIDK-SATESPANNDVQAVDANGNIVGDITNDVTITSEATDTNGVIVNA---SKSTANGDTVYVITDNGSKKVGKETLTVKLGLGTVDVEVIDTTLKTVVTKKADLIELDAADNGDALAKLLANLDIKDQNNPMVDSAATPNTNEKLQALKSV--LSGIVSSDTSVIGSVSNVDNLKDDASISGLAVKKAGTVTLTLVFNEDSKIAP--IAITVKAPA-- |
5 | 6degA | 0.10 | 0.06 | 2.33 | 0.81 | CNFpred | | --------KLRLVATDGHRLAQVDMEAPSGVDGMP----GVIIP-----------------RKAVGELQKLLSEEIDGDVCIELS------------------ETKIRFSLG-----------SVVFTSKLV-DGTFPDYQRVIPLGNDRKLIV-------------------NRQDFSSAVDRVSTISRGRAVKLTIE--------HGQLKLVVNNPD---SGSAEDQLAATYTSEP |
6 | 3qd1X3 | 0.24 | 0.07 | 2.23 | 0.48 | HHsearch-2 | | ----------------------------------FRIKTPETVFVNNPNQLTEVE-----KNLVREAVKKSNPDLRVTGITVS---------------NNGT----TTITYRDGRKDII-------------------DGSKFIDTRA--G--------------------------------------------------------------------------------------- |
7 | 3jc8Na | 0.10 | 0.08 | 2.99 | 1.22 | Neff-PPAS | | --LFAVVLIGAGVANYLWYDDRQSELEAHQAGVASTKARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGRSGPVRM-MDALASATPKKVWVKTFSENNNAVSIDGSAVSHDEVAEFMRGLNGVVWTPKGMGRLVDRRRDSKTARVEMLTSDATIEEFPEAQV-------------------SPFFKNIDLQTAKQVGGAQVGVPILVEFKITMTSNY----------------- |
8 | 3qd1X3 | 0.24 | 0.07 | 2.23 | 0.53 | HHsearch | | ----------------------------------FRIKTPETVFVNNPNQLTEVE-----KNLVREAVKKSNPDLRVTGITVS---------------NNGT----TTITYRDGRKDIDGS-KFI-------------------DTRA--G--------------------------------------------------------------------------------------- |
9 | 3g3lA2 | 0.12 | 0.09 | 3.29 | 0.61 | SP3 | | -------------------------------------VIPPVVPPTDPETDINEGEATKVADKAVEVAKPSESTVTDLA---GTTATPEEKKALDETLEAGGKVGETTPEVLADGSILAITPVKFTNPIQDAPAVPYFYNEGCELTGDVKEVAAPVAVA--------ADIQKAFLSNAAKALNNAGFVQKI--GYTRISVLNGYSILGYTIKGQLVSKKLTFLISGKYYEGIVSYQKS |
10 | 3g3lA | 0.12 | 0.11 | 4.00 | 0.89 | PROSPECTOR2 | | PAEAKYYIAGTITDATTKRQVYLNQVSDGQLVSVEAAVIPPVVPPTDPETDINEGEATKVADKAVEVAKPSESTVTDLAG---TTATPEEKKALDETLEAGGKVGETTPEVLADGSILAITPVKFTNPIQDAPAVPYFYNEGCELTGDVKEVAAPVA------------VAADIQKAFLSNAAKALNNAGFVQKIGYTRISVLNGYSILGYTIKGQLVSSGKYYEGIVSYQIYPNYYS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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