Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | QETSAIKDAKRRLKQRCEDDLKNLHDAIQKADMEDAEAMKRFATQKEKSEKFIQENLDRQDEAWRRIQELERVLQRLGTERFEEVKRRIEENDREEKRKVEYQQFLDVCGQHKKLLELSVYNCDLAMRCIGMMEELVAEGCSAIKSRHDKTNEELGDLRLQVHQEYLEAFRRLYKTLGQLVYKKEKRLEEIDRNIRTTHIQLEFAIETFDPNAKKHSDAKKELYKLRAQVEEELEMLKDKMAQALEMFGPTEDALNQAGIEFVHPAEEVEDGNLTRRSKMVEYRAHL |
1 | 5j1iA | 0.09 | 0.09 | 3.45 | 1.16 | SPARKS-K | | SRCQRCISELKDIRLQLEACETRTVHRLARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEALPELEATKASLKKLRAQAEATFDALRDELRGAQEVGERLQQRHWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQMDSQAVREQLRQEQALLEEIERKVEECQRFAKQYINAIKDYELQLVTYKEKVQSGSESVIQEYVDLRTHYSELTTLT |
2 | 2tmaA | 0.13 | 0.12 | 4.24 | 1.89 | FFAS-3D | | DAIKKKMQMLKLDKENALDRAEQAEADKKAAE----DRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIA--EDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNL----KSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTK----LEKSIDDLEDELYAQKLKYKAISEEL |
3 | 2qa7C | 0.17 | 0.06 | 1.95 | 0.39 | HHpred | | -------DEKDHLIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDELRRQREDTEKAQRSLSEIERKAQANEQRYSKL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 5nnvA | 0.11 | 0.09 | 3.24 | 1.28 | MUSTER | | ----------------------------------AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL-------------------------- |
5 | 5j1iA | 0.11 | 0.10 | 3.81 | 1.03 | CNFpred | | RECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLSPAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQEEVLRAHEEQLKEAQAVPATLPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHG-EVERWRERVAQLLWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAM--QAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQ-QSGSESVIQEYVDLRTHYSELTTLT |
6 | 5j9qD | 0.17 | 0.07 | 2.19 | 0.51 | HHsearch-2 | | MDPSLVLEQTIQDVSNLPSEFRYLLEEIGSNDLKLIEEKKKYEQKESQIHKFIRQQGPQEDGLDKEIKESLLKCQSLQREKCVLANTALFLIAR-----------------HLNKLEKNIALLEEDGVLAPV----------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 5nnvA | 0.12 | 0.09 | 3.34 | 1.71 | Neff-PPAS | | ----------------------------------AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQ------LSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESS-----STSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL------------ |
8 | 1vt4I3 | 0.17 | 0.09 | 3.10 | 1.37 | HHsearch | | ----------------------------------------------------------------------------------------------------EY------------ALHRSIYNIPKTFDSDDLIPPYLQYFYSHIGHH-------------LKNIEHPERMTLFRMVFLDFRFLEQK-IRHDSGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLIYTLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGG- |
9 | 1c1gA | 0.11 | 0.11 | 3.90 | 1.33 | PROSPECTOR2 | | MDIKKKMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEAL-KDAQEKLELAEKKATDAEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEERKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQ----AEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTS-I |
10 | 6ianC | 0.10 | 0.08 | 3.09 | 0.14 | SAM | | ---------------------------------RRVDALRTAHADPADARRAVTVLEEECDRLRGYIQVAEKKLAGVPDKEALLNACKSLRAALEEESR--LAEKGVELQQQLISSRQRSTE-QNLRR--DAADGRVDVIVRRLRDEIQTNKI-IEEQLPKELQQKQRENAEFDRL-----QALTTENQQLDEALKKLHQQVKERQKPGEDGSATIKQQVERVAKRKVEV-EQLTGLQADNSRTLNDIRERENRIEQLREAHHLKDDDFREFSKQVLAKKAATE--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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