Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | DWASYFCRVEDKPASIRLNLALHDCAPIQNYKHRIWFSIKLLNPDENGFTTREEFPVICTIEDAIAEALEKIGAIFVGALKTNGTFDMYSYSKNVENLDEVIHGVMKNYSDYNYATDTKEDTQWDTYFNFLY |
1 | 6f72A | 0.09 | 0.08 | 3.18 | 0.78 | SPARKS-K | | YWALSGGGGGTFAVVLSMTARLHRDGI------VGGTLLGFNDSAVG---NEVYWEAVAAFHALLPDFLDGGNSFTYSVGNNSLTAYGTMPGADRDAVDRLLRPFLDDLRGITPVVQPRVSTNYDHFFTYLG |
2 | 4nl4H5 | 0.05 | 0.04 | 1.73 | 0.69 | FFAS-3D | | ----------------------RQTMQLPPWTSHVLIRA-------EDHNNQQAPLFLQQLRNLLQASPLADEKLWVLGPVPALRWQILLQHPSRVRLQHIVSGTLALINTLPEAWVLDVDP---------- |
3 | 2n2tA | 0.18 | 0.10 | 3.21 | 0.30 | HHpred | | ---------------------------------QWQIKIYSE--------NEREFR-------ELIERLEEEPSVQYTETTRNGRRQLTIRSNDKNEVDRILEEVRRKVPNARVRTGSLEH----------- |
4 | 3rj8A | 0.10 | 0.09 | 3.37 | 0.62 | MUSTER | | D-RIVEASATENAIVAVWKLATFPAPKV-----LTRFGVTLNWKN-----KTSALKGIEAVEDYARWVAPREVNFRIGDYGAGNPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIESVLSYSN |
5 | 1zr6A | 0.08 | 0.07 | 2.65 | 0.79 | CNFpred | | ------------AIVSEFEFNTFEAP-----EIITTYQVTTTW------NRKQHVAGLKALQDWAQNTMPR-ELSMRLEINANALNWEGNFFGNAKDLKKILQPIMKKAG-GKSTISKLVETDWYGQINTYL |
6 | 1n6zA | 0.07 | 0.05 | 2.14 | 0.34 | HHsearch-2 | | -----MSKSNTYRMLVLLEDDTKINKPGKMHEFVDELI----------LPNVDELDELNTWFDKFDAEICIPEGHIKYEISSDGLIVLMLDKEIE-EVVEKVKKFVEENN---------------------- |
7 | 2axoA1 | 0.06 | 0.05 | 1.97 | 0.66 | Neff-PPAS | | ---------AVKGVVELFTSPADEALRKIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYRALGRNGVYTPQAILNGR----DHVKGADVRGIYDRLDAFKREGQG--------------------- |
8 | 2n2tA | 0.16 | 0.10 | 3.27 | 0.42 | HHsearch | | -------------------------------MGQWQ--IKIYSE------NEREFR-------ELIERLEEEPSVQYTETTRNGRRQLTIRSNDKNEVDRILEEVRRKVPNARVREETGSHHHHHH------ |
9 | 1kgdA | 0.09 | 0.07 | 2.56 | 0.70 | SP3 | | EDAMYGTKLEGLIAILDVEPQALKVLRTAEFA-PFVVFIA-APTITPGLNEDESLQRLQKESDILQRTYAHYF-------------DLTIINNEIDETIRHLEEAVELVC---------------------- |
10 | 5cw9A | 0.08 | 0.08 | 2.97 | 0.56 | PROSPECTOR2 | | MEMDIRFRGDDPEAYYKALREMIRQARKFAGTVTVTLIIRFRGDD---------LEALEKALKEMIRQARKFAGT-VTYTLDGNDLEIRITGVPPQVILELVKEAIRLAKEFNITVTVETGVPEQVRKELAL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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