Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | DDLQALEDWAAPLLAQLEAKERRRLARAIARDLRRSQRQRIRSQTNPDGTPYAPRKPQKWRARQGSIRRSAMFDKLSTAKWMKATAHGDTAVVSFMGNVARIARTHQYGLRDRVDRDGPTIEYPQRELLGFTDADRELVINALFTHL |
1 | 4wkkA3 | 0.11 | 0.10 | 3.41 | 0.74 | SPARKS-K | | -SAEKLMGELTSLAKYLSAPSLEDALFRTAQLVSSISDWSGHVVAEAGSGALPSYLGLRFPAGDIP---PQARQLYTINR---LRMIPASMSVSIVVNGALWGLIACHH-ATPHS---------------VSLAVREACDFAAQLLS |
2 | 1hrkA1 | 0.13 | 0.12 | 4.24 | 0.64 | FFAS-3D | | ETLGDVHDFLLRLFLDMTLPIQNKLAPFIAKRLTPKIQEQYRRIGG--GSPIKIWTSKQGEG-----MVKLLDELSPNTAPHKYYI---GFRYVHPLTEEAIEEMERDGLERNQVGRKPTMKWSTIDRWPGNPLFSKALADLVHSHI |
3 | 2fm8C | 0.12 | 0.10 | 3.33 | 0.25 | HHpred | | KAIMEFAGLFRSALNATSP-EAKTLLMKVGAEYTAQIKDGLKE-KSAFG-PWLPETK---KAEA---KLENLEKQLLDI--IK-N--NELSKLSLVMEVMPYIIEHNFGCTL-------------------DPLTRSNLTHLVDK-- |
4 | 6gym0 | 0.11 | 0.11 | 3.94 | 0.66 | MUSTER | | DALRRATRGANALDERISEVRKSQKLQDEYEKLVQGLGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSFLQHLKQLTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFA |
5 | 6cbmA | 0.15 | 0.10 | 3.45 | 0.55 | CNFpred | | ----TILAAADAALARVATGEPQRAVREAGDRFLRHARKALDDA----------------------------------SLPVEIAGDGTFFQFVPATEEALYGAANAEGLLFY-------AGDNQGVSAAFDEAVLGEAERRFARVC |
6 | 2pffA | 0.13 | 0.12 | 4.22 | 0.45 | HHsearch-2 | | PELKEFTAKLRK---ELV--ETSEVRKAVSIE--TALEHKVVNGNSA-DAAYAPRANIQLDFPEKPYKQKQIAAELEGL----LDLERVIVVTGFAGSADVKAKYETSILEHSGI-RLIEPENPEKEPFEASKETAEQFKHQHGDKV |
7 | 2zcxA | 0.08 | 0.08 | 3.18 | 0.69 | Neff-PPAS | | EGWKEWSAELCARLRELPGAAPDAVGQVFAATLAAPLFCDLLAQAPLNLERNVSVESVRSFKIATLDEVGRIGAELRRLLGVD----ETQAVDVIATATSLAGALWQMATPGPHIQTLYRSDPRLAHAVVEVEPRLNRVLGALLRGI |
8 | 2r8wB2 | 0.19 | 0.10 | 3.08 | 0.29 | HHsearch | | ----------------------------LLPVPALQ----L--------RAAQA----------GNAEEKRLDAPLWAL--FK-E-F------GS--IRVIYAAANILSLTV---------SEPPRPILPLTSAERQRVEEALEAL- |
9 | 3gziA2 | 0.13 | 0.12 | 3.99 | 0.62 | SP3 | | ----PVLAQLHKARRETRQESPAALLQTYYSVSKHPHFPRLLRIAGLDQSLPENAEVTKAFYEVVNFENIAIFQRLKDKNLLKDDVDAHCAQLSFFAVFPFIVP------ENLLERVGIE----------LTPDFLQLLAEQNTRLL |
10 | 2po4A2 | 0.10 | 0.08 | 3.05 | 0.56 | PROSPECTOR2 | | DSTNALMESLGKLRSNYASNMPRGIAGKLVSSVTDAIYERMSD--VLKARAKDPNISAAMAMFGKQAASEAHAEELLARTSTVPVKRKGVLELQSTG-----------------TGAKGKINPKTYTI---KGEQLKALQENMLHFF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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