>PF05011 (145 residues) NKQVRFLALDKCLPRRHFLQLLDIHPHDGSPVAPPSTPPQHPGRFPLQYDPEWLAITRAL HGELTIGDRAAHAARDRGEAHYTPLIDEARAWVGEHVAALDVPANFVLTAPPHDGSPNWR NVPDQPFEYTNPQTAAFCEMLQVEN |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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Seq | NKQVRFLALDKCLPRRHFLQLLDIHPHDGSPVAPPSTPPQHPGRFPLQYDPEWLAITRALHGELTIGDRAAHAARDRGEAHYTPLIDEARAWVGEHVAALDVPANFVLTAPPHDGSPNWRNVPDQPFEYTNPQTAAFCEMLQVEN | |||||||||||||||||||
1 | 4pefA | 0.12 | 0.08 | 2.92 | 1.01 | SPARKS-K | EGPTHFIALGKIGYKNAI-SYLDLPLKQKTD---------------LEYDKDWVCNLIMTWPAFSNKAQFPDLSYS-ISELLSKRTKELDKKIIELWEKYTSRRFYIEKIYNELNI----------------------------- | |||||||||||||
2 | 4pefA | 0.17 | 0.10 | 3.41 | 1.73 | HHpred | -GPTHFIALGKIGYKNAIS-YLDLPL---------------KQKTDLEYDKDWVCNLIMTWPAFSNKAQ-FPLSYSISELLSKR-TKELDKKIIELWEGLKII---------YDSDT---------------------------- | |||||||||||||
3 | 4pefA | 0.15 | 0.08 | 2.80 | 1.11 | CNFpred | EGPTHFIALGKIGYK-NAISYLDLPLK---------------QKTDLEYDKDWVCNLIMTWPAFSN--AQFPDLSYSISELLSKRTKELDKKIIELWEKY--------------------------------------------- | |||||||||||||
4 | 4pefA | 0.11 | 0.08 | 2.74 | 3.48 | HHsearch-2 | EGPTHFIALGKIGYKNAIS-YLDLPLK---------------QKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSESIELWEKYIGLKIIYDSDTFDQFTSRRFYIEKIYNELNI----------------------------- | |||||||||||||
5 | 4pefA | 0.11 | 0.08 | 2.74 | 4.26 | HHsearch | EGPTHFIALGKIGYKNAIS-YLDLPLK---------------QKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISIELWEKYIGLKIIYDSDTFDQFTSRRFYIEKIYNELNI----------------------------- | |||||||||||||
6 | 4pefA | 0.12 | 0.09 | 3.20 | 2.11 | FFAS03 | -GPTHFIALGKI-GYKNAISYLDLPLKQ---------------KTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIE-------LWEKYIGLKIIYDSDT---DIQFTSRRFYIEK---IYNELNI-- | |||||||||||||
7 | 5k77A | 0.15 | 0.08 | 2.80 | 1.11 | CNFpred | EGPTHFIALGKIGYK-NAISYLDLPLKQ---------------KTDLEYDKDWVCNLIMTWPAFSN--AQFPDLSYSISELLSKRTKELDKKIIELWEKY--------------------------------------------- | |||||||||||||
8 | 2o2xA | 0.12 | 0.11 | 3.90 | 0.81 | SPARKS-K | PGVWIERIGGRVFPPHLPALFLDRDGVDTDYPSDPAEIVLRPQ-------LPAIATANRAGIPVVVVTNQSGIARGYFG---WSAFAAVNGRVLELLREEGVF--VDVLACAYHEAGVGPLAIPDHPRKPNPGLVEAGKRLALDL | |||||||||||||
9 | 4pefA | 0.11 | 0.09 | 3.21 | 0.98 | FFAS-3D | -GPTHFIALGK-IGYKNAISYLDLPL---------------KQKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIE-------LWEKYIGLKIIYDSDTFDIQFTSR--RFYIEK---IYNELNI-- | |||||||||||||
10 | 1xpjA | 0.17 | 0.13 | 4.33 | 0.84 | MUSTER | ---MKKLIVD----------LTQ----ANTSDYRNVLPRLD--------VIEQLREYHQLGFEIVI-----ARNMRTYEGNVGKINIHTLPIITEWLDKHQVPYDEILVGKPWCGHDGFDDRAVRPSEFASMNLEEIHQLFEKEK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |