Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | CRENDLTCYFCGGGCIGAIRHKGFIPWDDDLDFFMPRKDYEVFVKKWKDYEPGKRYILSDTTLDYVDRNNFATLRDSETTQIKPYQKDLRIPHGVALDVIPLDGYPDGKWKRKFQCMWALIYQLFRAQTVPEKHGGLMAVGSRFLLSVFRGKKIRYKIWNVAKRHMTQYPISECNYITELCSGPFYMKKKYKKEWFEKAVFVPFEGENMPIPVGYDGYLKEAFG |
1 | 5uvdA | 0.08 | 0.06 | 2.43 | 0.67 | SPARKS-K | | LDSLNIDYAIMGGAATCLLRRTE------DVDLVIHVDTADNLTTQLLKSFPSD----FEGVSQFGHTIPAYKLRRGTVQLVELEYQSWPYDLGQKVKLFS------------PEWILREKILSQYQRQGSRKEGTDIRDIISMIPLAVPGKPELQELQTALANLVQKRPDLSSALKAKIKCSAVFHN------------------------------------ |
2 | 4wqkA | 0.15 | 0.09 | 3.15 | 0.65 | FFAS-3D | | -DERNLPLWIGGGWAIDARLGR-VTRKHDDIDLTFPGERRGELEAIVEML---GGRVMEELDY-------GFLAEIGDEL----------------LDCEPIAEAPQGSCPEANSWEAIIWDYFYYADEVPPVDWPTKHIESYRLACTSLGAEKVEVLRAAFRSRYA--------------------------------------------------------- |
3 | 2ewrA | 0.12 | 0.07 | 2.37 | 0.41 | HHpred | | -KNEKVNWV-VTGSLSFAL--QGVPVEVHDIDIQTDEEGAYEIERIFSEFVS-KK--V-RFSSTEKICSHFGELIIDGIKVEI-GDIRKRLEDGTWEDPVETHKIPVLSLEYEYQA-----YLKLGR-------VEKAETLRKWLN------------------------------------------------------------------------------ |
4 | 6dymA | 0.10 | 0.08 | 2.99 | 0.64 | MUSTER | | ---------------------------MLKMEAV-RLEHRQEVIDIIVASFYNKADLEQWLKPGVLRTDYWNVLVERDLSFVVYDTNTDRI--GTALNFDARNEVDIKSKLLIVFEFLEFCEGPIRDNYLPKGLNQILHSFMMGTLNPRENIACMHFMEHEVLRVAREK---QFAGIFTTNTSPL-TLLNFQVNEYVHS-SRPFGD----APDEQRAIVKEV-- |
5 | 3zokA | 0.07 | 0.04 | 1.66 | 0.60 | CNFpred | | -----------------------------CTFVALGGGVIGDMCGYAAASFRGVNFIQIPTAQVDSSVGGKTGINHRLGKNLIGAFY---QPQCVLIDTDTLNTL----PDRELASGLAEVVKYGLIR-----DANFFEWQEKNMPALM-LAYAIKRSCENKAEVVSLDE------------------------------------------------------ |
6 | 2ewrA | 0.10 | 0.06 | 2.17 | 0.65 | HHsearch-2 | | LKNEKVNWVVTGSLSFA--LQ-GVPVEVHDIDIQTDEEGAYEIERIFSEF----VSKKVRFSSTEKICSHFGELI----------------IDGIKVEIGDIRKRLEGTWEDPV-----DLNKYKRFVETKIPVLSLEYEYQAYLKL-GR-----VEKAETLRKWLNERK------------------------------------------------------ |
7 | 4wqkA | 0.13 | 0.09 | 3.23 | 0.85 | Neff-PPAS | | ADERNLPLWIGGGWAIDARLGRVTRK-HDDIDLTFPGERRGELEAIVEMLEELDYGFLAEIG--DELLDCEPAWWADEAYEIAEAPQGSCPAAEGVIAGRPVRCNS---------WEAIIWDYFYYADEVPPVDWPTKHIESYRLACTSLGAEKVEVLRAAFRSRYAA-------------------------------------------------------- |
8 | 2ewrA | 0.08 | 0.05 | 1.92 | 0.99 | HHsearch | | LKNEKVNWVVTGSLSFA--LQ-GVPVEVHDIDIQTDEEGAYEIERIFSEF----VSKKVRFSSTEKICSHFGELI----------------IDGIKVEIRKRLETWEDPV--D-------LNKYKRFVETKIPVLSLEYEYQAYLKL-G-----RVEKAETLRKWLNERK------------------------------------------------------ |
9 | 4grvA | 0.07 | 0.05 | 2.03 | 0.55 | SP3 | | LTVM------------------------------------VNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKRNTNG----------VITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLNNKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTG--------------------- |
10 | 4e8iA | 0.16 | 0.09 | 2.96 | 0.80 | PROSPECTOR2 | | NNEHKVTYWLDGGWGV-DVLTGKQQREHRDIDIDFDAQHTQKVIQKLED----IGYKI----EVHWPSRELKH------------------EEYGYLDIHPINLNDDG---------------------------------------------------------------------SITQANPEGGNYVFQNDWF---SETNYKDRKIPCISKEAKNLKSI-T |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|