Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | FVCSLCKYRTFYEDEMASHLDSKFHKEHFKYVGTKLPKQTADFLQEYVTNKTKKTEELRKTVEDLDGLIQQIYRDQDLTQEIAMEHFVKKVEAAHCAACDLFIPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLMVARSILNNKLISKKLERYLKGENPFTDS |
1 | 1zu1A | 0.15 | 0.09 | 2.88 | 1.14 | HHsearch | | TQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGED-----------------------SV--PAKKFKAAPA-------EISDGEDRSKCCPVCNMTFSSPV-VAESHYIGKTHIKNLRLREQ------------------------------------ |
2 | 1zu1A | 0.16 | 0.09 | 3.05 | 1.04 | FFAS03 | | TQCKVCSAVLISESQKLAHYQSRKHANKV------------------------RRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKC--------CPVCNMTFSSP-VVAESHYIGKTHIKNLRLREQ------------------------------------ |
3 | 4uosA | 0.15 | 0.15 | 4.93 | 0.93 | SPARKS-K | | DNEEVKKMLEKMIEEIKKMLEKKKVKEMLEKMIKEIKKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEEVKKMLEKMIEEIKKMLEKKVKEMLEKMIKEIKKMLESEKILKKAKEMAEKILKMVIELAEKILKKKEMAEKILKKVKELGVG--- |
4 | 1fewA | 0.10 | 0.08 | 2.97 | 0.92 | FFAS-3D | | -------------EAITEYTKASLYRQYTSLLG-KMNSEEEDEVWQVIIGARAEMTSKHQEYLKLETTWMTAVG---LSEMAAEAAYQTGADQASITARNHI-----QLVKLQVEEVHQSRKAETKLAEAQIEELKQKTQEEGEERAESEQEAYLRED------ |
5 | 1zu1A | 0.15 | 0.09 | 2.88 | 0.65 | HHpred | | TQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGED-----------------------SVPAK--KF-K-AAP-----AEISDGEDRSKCCPVCNMTFSS-PVVAESHYIGKTHIKNLRLREQ------------------------------------ |
6 | 3tnfB | 0.10 | 0.10 | 3.63 | 0.75 | MUSTER | | FEKLLTDSEELSLSEINEKMEASKDSEKLTQLMEKHDEKTVQSLQREHHDIKAKLANLQVLHDAHTGKKSYVNEKGNPVSSLKDAHLAINKDQEVVEHEGQFYLLQKGQWDAIKNNPAALEKQKDYSQSKHDLATIKMEALIHKEKQLETINNLIMSTDPKENE |
7 | 1st6A | 0.08 | 0.07 | 2.63 | 0.64 | CNFpred | | -------------KDLKARMQEAMTQEVSDVFSD--TTTPIKLLAVAFEERAANFENHAARLGATAEKAAAVGTAKTTVEGIQTVKSARELTPQVVSAARILLRNGNQAAYEHFETM------KNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIK-------- |
8 | 1zu1A | 0.15 | 0.09 | 2.88 | 0.95 | HHsearch-2 | | TQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGED-----------------------SV--PAKKFKAAPA-------EISDGEDRSKCCPVCNMTFSSPV-VAESHYIGKTHIKNLRLREQ------------------------------------ |
9 | 5nnvA | 0.09 | 0.09 | 3.30 | 0.87 | Neff-PPAS | | -RKEVLKKKNAVQNQEQLEEAIVQFQQKETVLKEELSEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKE |
10 | 5o9zQ | 0.17 | 0.07 | 2.40 | 0.74 | HHsearch | | ------------------------------------------------------------------------------------------QPKKFCDYCKCWIADNRPSVEFHERGKNHKENVAKRISEIKQKSLDKAKEEEKASMEAAALKAYQEDLKR---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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