Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | ASIIFAGLVASIARSNWISFVVYSAVLFIYCLKKKKYIKRYMMCLGIFVVVFLLLNLLTDSSIASRLNSIGLDAKKITMKDNDTAGSSRLYIWKRGITFIPEHPLLGSGPDTFGVVFLEKYFDELKYMQDITGGIVDKAHNEYLQLAVTSGIPALLIYL |
1 | 5uj9A3 | 0.08 | 0.08 | 3.20 | 0.80 | SPARKS-K | | TVDSMIPQVIKMFMGSLFNVIGACIIILLATPMAAVIIPPLGLIYFFVQRFYVASSRQLKSPVYSHFNETLLGVSVIRAFEEQQSDLKVDENQKAYYPSIVANRWLAVRLEVGNCIVLFASLFAVISRHSLSA-GLVGLSVSYSLQVTTYLNWLVRMSS |
2 | 4xtlA | 0.10 | 0.08 | 2.83 | 0.74 | FFAS-3D | | --FTSHILTL-----GYAVMLAGLLYFILTIKNVDKKFQMSNILSAVVMVSAFLLLY----AQAQNWTSSEVGRYFLDPSGDLFNNGYRYLNWLIDVPMLLFQIVVSLTTSKFSSVRNQ------------------FWFSGAMMIIT--GYIGQFY-- |
3 | 6a2jA | 0.10 | 0.08 | 3.05 | 0.23 | HHpred | | -----------SHRSGISIILVLSLAFWSWRKITPRETTFLAIMSIIFLLLGALAVVFGSNALIMALHFGILLIFEADKSVRQIGKKMQFHMIGILIVVYTGAYVRHTESSLACPNVPLC-SPLNNGLPTQFHEWVQMGHRAAALL------------- |
4 | 2d4uA | 0.08 | 0.08 | 3.17 | 0.84 | MUSTER | | GSGGLFFNALKNCKENFTVLQTIRQQQSTLNGSWVALLQTRNTLNRAGIRYMMDQNIGSGSTVAELMESASISLKQAELPRDPRQSTAAAAEIKRNYDIYHN------ALAELIQLLGAGKINEFFDQPTQGYQGFEKQYVAYMEQNDRLHDIAVSDNN |
5 | 5t0oA | 0.10 | 0.08 | 3.05 | 0.91 | CNFpred | | LVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALILAIGIVVDDAIIVVENIDRILHENEQI----------SVKDAAIQAMQEVSSPVISIV--LVLCAVFVPVSFI-------------SGFVGEIQRQFALTLAISVTISG |
6 | 1vt4I3 | 0.09 | 0.06 | 2.18 | 0.43 | HHsearch-2 | | ---------------------------------EY-ALHRSIVDH------YNIPKTFDDQYFYSHIGHHLKN----------IEHPERMTLFRFLEQKI-RHDSTAWNASILNT-LQQLYKPYICD----NDPKYERLVNAILDFLPKIEELLRIALM |
7 | 6cc4A2 | 0.09 | 0.08 | 3.16 | 0.75 | Neff-PPAS | | VAFKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAGMLAAPWVIMVTAPGFADTAD--------KFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIPAFAPTLLNISMIGFALFAAPYFNPPVLALAWAV |
8 | 2rddB | 0.14 | 0.03 | 1.08 | 0.22 | HHsearch | | -----------SPMSLILMLVVFGLIFYFMILRPQQRTKEHKKLMD--------------------------------------S-------------------------------------------------------------------------- |
9 | 3wajA1 | 0.11 | 0.11 | 3.86 | 0.79 | SP3 | | AGITIGLYVLSWGAGFIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIY--LPFAFNYPGFSTIFYSPFQLLVLLGSAVIAAAFYQIEKWNDVGFFVGLGRKGMPLAVIVLTALIMGLFFVLTNAVLHFG---ALFFFGMAGILYSAYRF |
10 | 5vchA1 | 0.06 | 0.06 | 2.52 | 0.67 | PROSPECTOR2 | | ALPALIHILQNSSKQSLLNSAANARVIASIGSEWPELIPNLLKIRETAIFIILSLLESFNANLALHIDDFLNLFAQT--INDSASLETRSLSAQALSYVSSLIEEEGEINPQYAAKFASLIPSVVQVLDATIREGDTTNTKLIFNCLNDFLLLDSQLTG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|