Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | VFTSDPEASGESGLHTPVSQATTLHVPSQDPAGIQHLQPAHRLSASPTVSSSSLVLYQSSDSTNGHSHLLPSNHGVIETFISTQMASSS |
1 | 3hgfC | 0.09 | 0.08 | 3.04 | 0.97 | SPARKS-K | | ---KKIENIVTKIDKKKYIYKKLLNEIAEIEKDKTSLEEVKNINMSYGKSLNK----LFLEKIKKKSENMIKSMEKYIKDLDEIKEQSP |
2 | 2ftcN | 0.08 | 0.07 | 2.67 | 0.32 | FFAS-3D | | EILEGKDAGKQGKVVQVIRQRNWVVVGGLNTHYRYMDYRGTMIPSEAPLLHRQVKLVDPMDRKPTEIEWRFTEAGE------------- |
3 | 3amtA | 0.10 | 0.07 | 2.52 | 0.27 | HHpred | | ------------------WCNDVVVCIPNTPCPVLALYKAESVKT---EPVDR-RIFVTNHATDH--LIGEEEVHRLENYRSYRLR--- |
4 | 4nl6A | 0.15 | 0.15 | 4.94 | 0.95 | MUSTER | | IEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGP |
5 | 5xf7A | 0.11 | 0.04 | 1.63 | 0.51 | CNFpred | | ----------------------------------------------------ELKLFFEGNRSEPISCKGVVESAALVVWLRRQISQKA |
6 | 2pffB | 0.25 | 0.25 | 7.67 | 0.51 | HHsearch-2 | | PNTSLPEGVPSPMLSISNLQKTNSHLPAGKQVEISLVNGAKNLVVSPKAPSERKLKFSNRFASPFHSHLLVPASDLINKDLVKNNVSFN |
7 | 3j9aA | 0.11 | 0.10 | 3.62 | 1.24 | Neff-PPAS | | ---------SNFKVRDPVIQERLDHDYAHHPL-VARMNTLDQGNMSQAEYLVQKRHYLVFLIAHHYEAYLRRMGGIQRRDHLQTLRDQK |
8 | 5a1uG7 | 0.24 | 0.10 | 3.16 | 0.33 | HHsearch | | ----------------------------------EHRHSYVRRNAVLAI----YTIYRN------FEHLIPDAPELIHDFLV------- |
9 | 2n73B | 0.09 | 0.08 | 2.99 | 0.64 | SP3 | | -------GAMVEARSLAVAMGDT----VVEPAPLKPTSEPTSGPPGNNGGSLLSVITEGVGELSVIDPEVAQK-ACQEVLEKVKLLHGG |
10 | 2n73B | 0.07 | 0.07 | 2.72 | 0.49 | PROSPECTOR2 | | GAMVEARSLAVAMGDTVVEPAPLKPTSEPTSGPPGNNGGSLLSVITEG---------VGELSVIDPEVAQKACQEVLEKVKLLHGGVAV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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