Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | QANQLLPQLSDNDSEIAKAKKSLDAEIKNANQAVASNNTASMQSAKSSLDAKVTEITKKLETFNKDKEAKFNELKQTRNQIQEFINTNKNNPNYSELISQLTSKRDSKNSVTDSSNKSDIESANTELKQALAKANADKVQADNLAKSIKEQLNNSV |
1 | 2tmaA1 | 0.08 | 0.08 | 3.01 | 1.26 | FFAS-3D | | --DAIKKKMLDKENALDRAEQAEADKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQK--------LEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEA- |
2 | 4tqlA1 | 0.12 | 0.12 | 4.07 | 1.00 | MUSTER | | -YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRK-QEVKQEVEKAIEEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEK-----LLKEMKQRMEEVKKKMDDELLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLI |
3 | 4uosA | 0.15 | 0.15 | 5.15 | 0.96 | SPARKS-K | | EVKKMLEKMIEEEKAIKKVKEMLEKMIKEIKKMLENGELKMVIELAEKILKKAKEMAEKILKKVKELEEVKKMLEKMIEEIKKMLEKAIKKEMLEKMIKEIKKMLENGED-SEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELG |
4 | 3na7A1 | 0.09 | 0.07 | 2.66 | 1.24 | FFAS-3D | | ------------EPLIREKRKDLD----------------KALNDKEAKNKAILNLEEEKLALKSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKER---------SNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALEL- |
5 | 6d03E | 0.11 | 0.10 | 3.71 | 0.29 | HHpred | | --EERISKLIDSEYFITETLKLAEDVYDKNTKLIINEFKKDYDNNVEDLRESIIYIQSYVSSIKS----AYRYNVLEKDSVESKQKNIPANSNAQKKVDELLSIIDSIYSNF---SVAENFQKMKDYYKEIEKLKIKILQLIEAIKKYQQHVEELI |
6 | 3na7A1 | 0.08 | 0.06 | 2.51 | 0.95 | MUSTER | | ---------------LEPLIREKRKDLDKAL-----NDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEI----KSERELRSLNIEEDIAKERSNQANRE--IENLQNEIKRKSEKQEDLKKEMLELEKLALEL-------- |
7 | 4tqlA | 0.14 | 0.13 | 4.39 | 0.73 | CNFpred | | QMVQELEKARDREKLYKEMVELIQKAIELMRKIFQ-EVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIGGDKQKMEELLKRAKEEMKKV--KDKMEKLLEKLKQIMQE--------AKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKM |
8 | 6d03E | 0.11 | 0.10 | 3.72 | 0.54 | HHsearch-2 | | HKEKIVSKLIDSEYFITETLKLAEDVYDKNTKLILNEFKKDYDNNVEDLRESIIYIQSYVSSIK----SAYRYNVLEKDSVESKQKNIPANSNAQKKVDELLSIIDSIYSNF---SVAENFQKMKDYYKEIEKLKIKILQLIEAIKKYQQHVEELI |
9 | 6ewyA | 0.11 | 0.11 | 3.92 | 0.98 | Neff-PPAS | | --DPQTDTIAALIADVAKANQRLQDLSDEVQAEQES--VNKAMVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTFAAATYMNASSQAVMANLQRARTERVNSAARLAKQKADKAAADAKASQDAAVAALTETRRKFDEQREEVQRLA |
10 | 6f1tX | 0.14 | 0.13 | 4.40 | 0.62 | HHsearch | | LAARLGKALLERNQD---MSRQYEQMHKELTDKLEHNREGEWEGRVSELETDVKQLQDELERQQLHLRRAVQELSEQNQRLLDQLSRAEVERQLSMQVHALKEDFREKN-----SSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLL- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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