Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | SQERLNAAMENPSMMRELLEICGTELAACIGPSIGDPVQRAKRPLNGFMAFRTYYLKLFPDTQQKNASGFLTQLWATDPNRNKWALIAKVYSFTRDHVGKAKCNLNPFLSVACPMMKIVEPSEYFGLFGWQVSHDSFGNMVLVQDLAVMANTMPPLENLEHPTTEIDLLTDILVAGYFSEYSQHLQVLMWTSQNGIMA |
1 | 5cwjA | 0.08 | 0.06 | 2.23 | 0.75 | SPARKS-K | | IRRILKEARKTEESLRQAIEDVAQLAKKS----------QDSEVLEAIRVILRIAKESGSEEALRQAIRAVAEIAKEAQDSEVLEEAIRVILRIAKESGSEEAQAIRAVAEIAKEA-----------------------------------------QDPRVLAIRVIRQIAEESG--SEEARRQAERAEEEIRRRAQ |
2 | 1v64A | 0.13 | 0.06 | 1.93 | 0.69 | FFAS-3D | | ------------------------------QLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKDAYHKKCDQKKKDYEV------ELLRFLE-------SLPEEEQQRVLG--------------------------------------------------------------------- |
3 | 2gzkA | 0.13 | 0.06 | 2.11 | 0.49 | HHpred | | --------KMLTEEAQKLQAMHREKYPNYKYRKKFKDPNAPKRPPSAFFLFCSEYRPEHPGLSIGDVAKKLGEMWNNTADKQPYEKKAAKL---KEKYEKD---IAAY------------------------------------------------------------------------------------------ |
4 | 1st6A | 0.12 | 0.12 | 4.25 | 0.74 | MUSTER | | SWDEDAWASKDTEAMKRALALIDSKMNQAKGDPNAPPGDAGEQAIRQILDEAGKAGELCAGKERREILGTCKTLGQMTGATPMAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSK--QAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAELCEEPKERDDILRSLGEI---SALTAKLSDLRRHGKGDSPE |
5 | 3m1iC | 0.08 | 0.07 | 2.59 | 0.73 | CNFpred | | LQQIATSVMPVTADLKATYANANGNDQSFLQD------------AMFLTTYLARNRALLESDLRELLLNAHQYLIQLS-ERELFKTTLDYWHNLVADLFY-EEICSQLRLVIIENMVRPE--------EVLVVEND--EGEIVREF-------KESDTIQLYKSEREVLVYLTHL-----NVIDTEEIMISKLARQID |
6 | 1i11A | 0.22 | 0.07 | 2.23 | 0.72 | HHsearch-2 | | --------------------------------------PHIKRPMNAFMVWAKDERRKFPDMHNSNISKILGSRWKAMTEKQPYYEEQARLSKQ---HLEK---YPDY------------------------------------------------------------------------------------------ |
7 | 5cwmA | 0.10 | 0.10 | 3.56 | 0.77 | Neff-PPAS | | SEEDLEKALRTAEEAAREAKKVLEQAEKEGD------PEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARES-GSEEAKERAERVREEARELQE |
8 | 4euwA | 0.20 | 0.07 | 2.11 | 1.03 | HHsearch | | --------------------------------------PHVKRPMNAFMVWAQAARRKYPHLHNAELSKTLGKLWRLLNEKRPFVEEAERLRV---QHKKDH-PDYKY------------------------------------------------------------------------------------------ |
9 | 1ij5A | 0.09 | 0.09 | 3.31 | 0.72 | SP3 | | EQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLMLSSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVSNGTLSRKEFREHFVRL-GFDKKSVQDALFR-YADEDESDDVGFSELLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESAREHQFSVVDVDDSKSLS |
10 | 2po4A2 | 0.10 | 0.09 | 3.33 | 0.73 | PROSPECTOR2 | | DLGKLRSNYASNMPIQSQIDSLLSLMDLPDINLGENGALELKRGINPLTITRGIAGKLVSSVTDAIYERMVLKARAKDPNISAAMAMF----------GKQAASEAHAEELLARF------LKDMETLTSTVPVKRKGVLELQSTGTGAKGKINP-KTYTIKGEQLKALQENMLHFF--------VEPLRNGITQTVG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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