Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | FDDKKIIIIGDRDGIPGPAIEECIKTTGGEVVFSSTECFVUTAAGAMDLENQNRVKEAAEKYGAENVVVLIGGAEAEAAGLAAETVTAGDPTFAGPLAGVQLGLRVYHVVEPEFKNEVDPDVYDEQIGMMEMVLDVDEIIEEVKDIR |
1 | 2dwcB1 | 0.15 | 0.09 | 2.97 | 0.07 | HHWb | | DSAQKILLLG--SGELGKEIAIEAQRLGVEVVAVDRYANAAHRSYVGNMMDKDFLWSVVEREKPDAIIPEIEAINLDALFEFEDGYF------------------------------------------------------------ |
2 | 2l82A | 0.13 | 0.11 | 3.78 | 0.64 | SPARKS-K | | --MSQIFVVFSSDPEILKEIVREIKRQGVRVVLLYSDVDVRTVED-KEDFRENIREIWERYPQLDVVVIVTTDDKEWIKDFIEEAKER-------------GVEVFVVYNKEAQQEFRSD------GVDVRTVDKEELIEQVRRFV- |
3 | 4zjuA1 | 0.18 | 0.16 | 5.30 | 0.73 | FFAS-3D | | LAGKRFLIAGVASKLSAYGIAQALHREGAELAFTY-----------PNEKLKKRVDEFAEQ-FGSKLVFPCDVAVDAEIDNAFAELAKH----WDGVDGVSIGFAPAHTLDGDFTDVTDRDGFKIDISAYSFVAMARAAKPLLQARQ |
4 | 2dwcB1 | 0.15 | 0.09 | 2.97 | 0.07 | HHpred | | DSAQKILLLG--SGELGKEIAIEAQRLGVEVVAVDRYANAAHRSYVGNMMDKDFLWSVVEREKPDAIIPEIEAINLDALFEFEDGYF------------------------------------------------------------ |
5 | 5m7nA | 0.16 | 0.16 | 5.18 | 0.67 | MUSTER | | HPELPVVMISGRRGFKADRLILVAERA-LETSKLKREVSDLRLELVGTSLAMNQLRQTIERVAPTNSRIMITGPSGAGKELVARAIHAQSSRANGPFVTVNAATITPERMEIELFG------TEMKVGALEEAHGGILYLDEVADMP |
6 | 2dwcB1 | 0.15 | 0.09 | 2.97 | 0.30 | HHsearch-2 | | DSAQKILLLG--SGELGKEIAIEAQRLGVEVVAVDRYANAAHRSYVGNMMDKDFLWSVVEREKPDAIIPEIEAINLDALFEFEDGYF------------------------------------------------------------ |
7 | 2l82A | 0.20 | 0.18 | 5.67 | 0.61 | Neff-PPAS | | --MSQIFVVFSSDPEILKEIVREIKRQGVRVVLLYSDQDEKRRRERLKEDFRENIREIWERYPQLDVVVIVTTDDKEWIKDFIEEAKER-------------GVEVFVVYNKEAQQEFRSDGVDVRTDKEELIEQVRRFVRKVGSLE |
8 | 2dwcB1 | 0.16 | 0.10 | 3.16 | 0.35 | HHsearch | | DSAQKILLLG--SGELGKEIAIEAQRLGVEVVAVDRYANAAHRSYVGNMMDKDFLWSVVEREKPDAIIPEIEAINLDALFEFEKD---G---YF----------------------------------------------------- |
9 | 3uveA | 0.17 | 0.15 | 4.93 | 0.72 | SP3 | | VEGKVAFVTGAR-GQ-GRSHAVRLAQEGADIIAVDRAGVVDTAIPASTPEDLAETADLVKGHNRR--IVTAEVRDYDALKAAVDSGVE---QL-GRLAGIGNG--------GDTLDKTSEEDWTEMINLAGVWKTVKAGVPHMIAGG |
10 | 2l82A | 0.19 | 0.17 | 5.49 | 0.62 | PROSPECTOR2 | | M--SQIFVVFSSDPEILKEIVREIKRQGVRVVLLYSDQDEKRRRERLEEDFRENIREIWERYPQLDVVVIVTTDDKEWIKDFIEEAK-------------ERGVEVFVVYNNKDDDRRKEAQQEFRSDGVDVVSDKEELIEQVRRFH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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