Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | SAAIITSLISLLDTSIEYQIKACRDYCKLLSVVVELEFKEFGYIDKHTLETKRWNDLARSNINILVFYQVRQLSISAEYLYDVFIKNREVPIRMYFVKDHLAFDGCPPLFRTINIDVKFTYRKKIRDLITISNMTTCNDKIMQDFINNNFGNVSSLLRIIDSDSIWLRKVIMSGKYKHGSKIRSYRHFMFTIRRIKKKEASSIDDICNNIQSITI |
1 | 3guvA | 0.09 | 0.06 | 2.11 | 1.12 | FFAS-3D | | -VYLYTRVSTSIQISLEAQKSRMKAFAIYNDYEIVGEYEDAGKSGKSIEGRIQFNRMMEDGVSFVLVFKLSRFARNAADVLSTLQIMQDYGVNLICVEDGI----------------DSSKDKLMISVLSAV--AEIERENIRIQTMEG------------------------------------------------------------------ |
2 | 4bqqA | 0.10 | 0.09 | 3.27 | 1.46 | HHpred | | YAGAYDRQSRERAASPATQRSANEDKAADLEFRFVGHF--SEAPG--AERPEFERILNAGRLNMIIVYDVSRFSRLKMDAIPIVSELLALGVTIVSTQEG-VFRQGNVDLIHLIMRLSHKESSLKSAKKRELGVGKAFRWWWREI-KTP-GSITGLCKRMDADAVWVMRILRDPRIAGCGPIIEPAEWYELQAWLDGR----------------- |
3 | 3bvpA | 0.14 | 0.08 | 2.69 | 1.47 | HHpred | | KVAIYTRVSTTNQASIDEQIDRLTKYAEAMGWQVSDTYTDAGFSGAKLERPAMQRLINNKAFDTVLVYKLDRLSRSVRDTLYLVKDFTKNKIDFISLNESI--DTSSAMGSL------------FLTILSAIN---------------------------------------------------------------------------------- |
4 | 3bvpA | 0.15 | 0.08 | 2.83 | 1.60 | HHsearch-2 | | KVAIYTRVSTTNQASIDEQIDRLTKYAEAMGWQVSDTYTDAGFSGAKLERPAMQRLINNKAFDTVLVYKLDRLSRSVRDTLYLVKDFTKNKIDFISLNESI--DTSSAMGSLFTIAIEFERELEY------------------------------------------------------------------------------------------ |
5 | 3bvpA | 0.14 | 0.08 | 2.85 | 2.30 | HHsearch | | KVAIYTRVSTTNQASIDEQIDRLTKYAEAMGWQVSDTYTDAGFSGAKLERPAMQRLINNKAFDTVLVYKLDRLSRSVRDTLYLVKDFTKNKIDFISLNESI--DTSSAMGSL------------FLTILSAIN----------EFEREL--------EY-------------------------------------------------------- |
6 | 4bqqA | 0.11 | 0.10 | 3.72 | 1.02 | FFAS-3D | | -AGAYDRQSRERSASPATQRSANEDKAADLQREVRFRFVGHFSEAPGAERPRILNECRAGRLNMIIVYDVSRFSRLVMDAIPIVSELLALGVTIVSTQEGVFRQGNVMDLSLKSAKILDTKNLQIRWWWREKTHKPGSITGLCKRMDADAVDPATVMRIL-RDPRIATLRPVELDCGPIIEPAEWYELQAWLDGRGRGKGLSRGQACE------- |
7 | 3bvpA | 0.15 | 0.09 | 2.96 | 1.09 | FFAS-3D | | -VAIYTRVSTTNQFSIDEQIDRLTKYAEAMGWQVSDTYTDAGFSGAKLERPRLINDIENKAFDTVLVYKLDRLSRSVRDTLYLVKDVTKNKIDFISLNESIDTSS-------------AMGSLFLTILSAINEF---EREL-------------------------------------------------------------------------- |
8 | 2mhcA | 0.15 | 0.07 | 2.50 | 1.60 | HHsearch-2 | | ITALYERLSRDDDNSITNQKKYLEDYARRNGFENIRHFTDDGFSGVNFNRPGFQSLIKAGNVETLIVKDMSRLGRNYLQVGFYTEVLPQKNVRFLAINNSI--DSNN------------------------------------------------------------------------------------------------------------ |
9 | 1xwyA | 0.12 | 0.11 | 3.81 | 0.71 | PROSPECTOR2 | | MFDIGVNL---TSSQFAKDRDDVVACAFDAGVNGLLI------TGTNLRESQQAQKLARQYSSCWSTAHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRNFST--------PEEQERAFVAQLRIAACFTGTREEMQACVAHGIRRGLELRELLPLIPALLPRDLTPKPSSRRNEPAHLPHILQRIAHWRGEDAAWLAATTDALFGIAF |
10 | 2mhcA | 0.15 | 0.07 | 2.50 | 2.27 | HHsearch | | ITALYERLSRDDDNSITNQKKYLEDYARRNGFENIRHFTDDGFSGVNFNRPGFQSLIKAGNVETLIVKDMSRLGRNYLQVGFYTEVLPQKNVRFLAINNSI--DSNN------------------------------------------------------------------------------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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