Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | KQQDGEEPAHATCGGTVEFLKTLSKSTEKCIDSVTLLPSQYPACSLINIKLVESLASRMTSTYILLEGEAKIYKNKKSDCRGDNAYFLMIKPTAASPMMYQLLECVYGNIRDGKRIPPSLCGINVAELEEKTLNKGCIFVNKLSGAVVEYKINGGKSKVRLIDEELESLAKRDKQISKTILVPIVFYRNSSTSKITFALKKLIIERDFSANVVDVDGKNEKISMVESTEEDLSRGLGVMELDDCIVEEEEEVESSLFNV |
1 | 4qanA | 0.12 | 0.11 | 3.99 | 0.57 | SPARKS-K | | PAPTSDYSYYFPLTSAKAYIEQFEELSTEILEVLEIAEKKEKAAQESELEIYVKCGEQLGFTAVQYEKNWKIHSEREAKKTYVLPYFQ-APISEKTP--QRAVEQFIYAIEKG-DLTRALAFATTESSQDELLKKQGEYAKELKTLYGFLGTEDARLYGKS-EEQLNKLRGKNPEYVYLDLIKVIPIENTETVKQYAGLYSYNGKNYLTGYTLCRQEDGWQIQSLSAP----ALSLESGEVRLSKEESRKTSEQSVLKA |
2 | 5uqjA | 0.11 | 0.08 | 2.76 | 0.61 | FFAS-3D | | -----TPAIHRQLQKIICKYKETFMK----VDFDPLFISHLGAPKPLHVSLRNGLRNNEITPFLQICSYPKLYISERAN-----TLYLGLPVSENKAQISPFKTIIAEALQK----------SGISNYQDLIVSRQNLHVS------IAIASNPSKATLKRYQQLNETMGALLLL------------NNDFAYKLEFLVNSI---------YCDENRHSIRIPFN---------------------------------- |
3 | 1k8hA | 0.17 | 0.07 | 2.40 | 0.42 | HHpred | | -----------------------------------------------------------------------IAENKEAKAKILETYEAGIVLKG--S--------EVKSLREGT------VSFKDSF---VRIENGEAWLYNLYI--APYNHDPLRKRKLLLHKEIMRLYGKVQE-KGYTIIPLKLYWKNNKVKVLIALAKG--------------------------------------------------------- |
4 | 3t58A1 | 0.11 | 0.09 | 3.34 | 0.54 | MUSTER | | -SVLYSSSDPLTLLDADSVRPTVLGSSS--AWAVEFFASWCGHAIAFAKELANDVKDWRPANLAVLDCTVRFFQAFTKNGSGAT-L------PGAGANVQTLRMRLIDALESHRTWPPACPPLEPAK--LNDIDG---FFTRNKADYLALVFEREDSYL--GREVTLDLSQYHA-----VAVRRVLNTESDLVN-KFGVTDF------SCYLLLRNGSVSRVPVLVESRSFYTS---LRGLPGLTRDAPP--------- |
5 | 2r6r1 | 0.16 | 0.12 | 3.87 | 0.84 | CNFpred | | ------------TGAAPVIAKTAKEMGILTVAVATLPFRFGPRKMEKALKGLEKLKES-SDAYIVIHND-KIKELSNRTLTIKDAFKE------VDSVLSKAVRGITSIVVT-----PAVINVDFADVRTTLEEGGLSIIGM-----GEGRGD--EKADIAVEKAVTSPLLEGNTIARRLLVTIWTSED-PEAEIIFGAVLEPEQDFIRVAIVATDFPEEKFQVGE--------------------------------- |
6 | 2pffB | 0.15 | 0.14 | 4.57 | 0.93 | HHsearch-2 | | ENPNTPDKDYLSCIGVIVTAKLLGPGERSYLKGATGHSQGLVTAV--AIAETDSWESFFVSVRPMLQEQVQDYVNKTNSHLPGKQVEISLVVVSGPQSLYGLN----LTLR-KAKAPSGLDQSRIPFSERKKFSNRFLP--VA--------SPFHSHLLVPASDLINKDLVKNSFNAKDIQIPV--YDTFDGSDLR-VLSGSISERICIIRLPVKWETTTQFKATHILDFGGASGLGVLTHDVAGTLDINPDDDYGFKQ |
7 | 3tnfB | 0.11 | 0.11 | 4.02 | 0.72 | Neff-PPAS | | EKHKGDEKTVQSLQREHHDIKAKLHTGKKSYVNEKGNPVSSLKDAHLAINKDQEVVEHEGQFYLLQKGQWDAIKNNPAALEKAQKDYSQSKHDLATIKMEALIHKLSLEMEKQLETINNLIMSTDPKENEEATKLLHHNGLNLKLANLQDMLAVHRKEKSFFNEKGEEV--TSLNDAHYVIGKDQQLFNLGGKFYPIHKEQKILEKDGKFYLLKQGEDWESIKDSPEKQKKAEHDFHKLQYETPLVHHNKGLETTIHKE |
8 | 1k8hA | 0.17 | 0.08 | 2.65 | 0.63 | HHsearch | | ---------------------------------------------------------------GKSDKIIPIAENKEAKAKILETYEAGIVLKG--S--------EVKSLREGT------VSFKDSF---VRIENGEAWLYNLYI--APYNHDPLRKRKLLLHKEIMRLYGKVQE-KGYTIIPLKLYWKNNKVKVLIALAKLY-DR----------------------------------------------------- |
9 | 3t58A1 | 0.10 | 0.08 | 3.17 | 0.53 | SP3 | | -SVLYSSSDPLTLLDADSVRPTVLGSSS--AWAVEFFASWCGHAIAFAKELANDVKDWRPANLAVLDCACREFNIAGFQAFTKNGSGATLPGAGAN--VQTLRMRLIDALESHRDTWPP-ACPPLEPAKLNDIDG---FFTRNKADYLALVFEREDSYLG--REVTLDLSQYHA-----VAVRRVLNTESDLVN-KFGVTDFP-----SCYLLLRNGSVSRVPVLVESRSFYTSYLRGLPGLTRDAPP----------- |
10 | 5njlA | 0.11 | 0.10 | 3.62 | 0.80 | PROSPECTOR2 | | VKKETITKK--EATELVSKVRDLGSQVGQPIYEIKVGETLSKL---KIITNIDELEKLVNALGENKELIVTITDKGHITNSANEVVAEATEKYENSADLSAEANSITEKAKTETNGIYKVADVKASYDSAKDKLVITLRDKTDTVTSKTIEIGIGDEKIDLRVNKIVKLGVAGAKNIDDVQLAEITIKNSDLNTVSPGTSKSIGKYKFTIKYTDASGKAIELTVESTNEKDLKDAKAALE------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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