Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | GNNRFQPGYQLSNNQFVSTSDINRITRNNDVPNIRGVFQGISDPQINSLGQLRRVDNVPDFNYHTKQTRSNAVKQNFPETNVRTPEGVQNALQQNPRLHTYMQSLKVGGTGILLATGGYFLFSAATLVQDIINAINNTGGSYYVQGKNGGENADACLLLQRTCRQDPNLNQSDVAICPFDPLLPNNPPELTNMCQGFNYEVEKTVCRGSDPSADPDSPQYVDISDLPAGQTLMCIEPYSFGDLVGDLGLDWLLGDEGLVGKSSNVSDSVSGKLMPIILLIGAVLFLGLIFYFIYRYI |
1 | 5wtjA | 0.13 | 0.12 | 4.30 | 0.64 | SPARKS-K | | NENKFQEIYYPKNELYIYKKNLFLNIGNPNFDKIYGLISNIRKNKISEIDAILKNLNDKLNGYKEYKEKYIKKLKENDDFFAKNYKSFEKDYNRVSEYKKIRDLVENKIESYLIDINWKLAIQARFERDHYIVNGLRELGIIKLSGYNTG--------ISRAYPKRNG-SDGFYTTTAYYKFFDEESKKFEKICYGFGIDSENS--EINKP--ENESSHFYIVRNPFADYSIAYSTRYNVFEVFKDVNLDYLIGNNDILERLKPKKVSVLESYNSDYIKNLIIELLTKIE------- |
2 | 6em5n | 0.10 | 0.09 | 3.38 | 0.64 | FFAS-3D | | GIYPREPRNKKAPTTFYYAKDIQYLMHEPVLAKFREH-----KTFARKLTRALGRGE---------VSSAKRLEENRDSYTLD-----HIIKERYPSFPDAIRDIDDALNMLFLFSNLPSTNQVSKIINDAQKICNQIKGVYYQANIKGEE--VRWLVPFKFPENIPSDVDFRIMLTFLEFYSTLLHFVLYKLYTDSGLIYPPKLDISGLSSYILESRYDSPVASLFSAFVFYVSREVPLEFLILSCGGNVISEAAMIVDRPVLKNKVAGRTYIQPQWIFDCINLVPANKYLPGEAL |
3 | 2pjpA | 0.08 | 0.02 | 0.80 | 0.29 | HHpred | | ---------------------------------------------------------------EEQQAIWQKAEPLFG-DEPWWVRDLAKETGTDEAMRLTLRQAAQQGIITAIVKDRYYRNDRVEFANMIRDLDQECGST------------------------------------------------------------------------------------------------------------------------------------------------------------ |
4 | 5hamA | 0.11 | 0.09 | 3.31 | 0.67 | MUSTER | | -------------DYWYTENEITHLLTAQDEKKFS-VQPAITRNTALTEEMLKDYTAKGEEKNKILAEVQETIKIANLIPDKEERALMLGDAKKREEILKLSDAEREKLKNDLLRGGEAQQQINEDILNRATKDIKDNGKAAVIPIEMGYGHWTVLVAKY-------DKKDNQIILTFNDSLINYDGQKLPKLIDKTLGNLPNKP----------------IIIDEQTKQQ----DQSACGVFTVDNGIKIAKGQAILSTEESK--GEKGLRLREHHAQILTDAMFKQDAQWIRQQ- |
5 | 1ce8A | 0.07 | 0.05 | 2.21 | 0.71 | CNFpred | | ----------------IHWEVVRKIIEKERPDAVLPTM--GGQTALNCALELERQGVLEEFGVTMIGATADAIDKAE------DRRRFDVAMKK-EEALAVAADVGFPCIIRPSFTGGGIAYNREEFEEICARGLDLSKELLIDESLIGWKEYEMEVVRDKN--------DNCIIVCSIEN---------------------------------------FDAMGIHTGDSITVAP-NASMAVLREIGVETGGSNVQFAVNPRLIVIEMNSRSSALASKATGFPIAKVAAKLAVGYT |
6 | 2pffB | 0.18 | 0.17 | 5.49 | 0.42 | HHsearch-2 | | QFNKILPGFAADDEPTTPAELVGKFLGYVSLVVLNLCLENCEGNDIHALAKLLENDTTLVKTIKNYITAFRAVGEGNAQLVAIFFEELRDLYQSAETLSEL---IRTTLDAE----KVFT--QGLNILEWLENPSNTPDKDYLLSIP------ISCPLITKLLGFTPGELSYAVAIAETDSWESFFITVLFVRCYELEDNNEGVPSPMLSISNLTQEQDYVNKTNLPAGKQVVSGPPQSLYGLNLTLRKAKASGLDQSSEKFSNRSPFHSHLLVPASDLINKDLVKN-NVSFNAKDI |
7 | 5hamA | 0.09 | 0.07 | 2.82 | 0.74 | Neff-PPAS | | -------------DYWYTENEITHLLTAQLDEKKFSVQPAITFRNTALTEEMLKDYTAKGEEKNKILAEVQETIKIANLIDKEERALMLGDAKKREEILKLSDAEREKLKNDLLRGGEAQQQINEDILNRATKDIKDNGKEAAVIPIEMGYGHWTVLVAKYD------KKDNQIILTFNDSLINYDGQKLPKLIDKTLGNLP--------NKPIIIDEQTKQQTD-----------QSACGVFTVDNGIKIAKGQAILSTEESKG--------------EKGLRLREHHAQILTDAM |
8 | 2pjpA | 0.08 | 0.03 | 1.31 | 0.31 | HHsearch | | ----------------------------------------------------------FS---EEQQAIWQKAEPLFG-DEPWWVRDLAKETGTDEAMRLTLRQAAQQGIITAIVKDRYYRNDRVEFANMIRDLDQECG----------S--TCAADFRDRL-GVGR-------KL--AIQILE--------YFD-----RIGFTRRRGNDH-------LLRD-------------------------------------------------------------------------- |
9 | 5hamA | 0.11 | 0.09 | 3.31 | 0.57 | SP3 | | -------------DYWYTENEITHLLTAQLDEKKFSVQPAITRNTALTEEMLKDYTAKGEEKNKILAEVQETIKIANLIPDKEERALMLGDAKKREEILKLSDAEREKLKNDLLRGGEAQQQINEDILNRATKDIKDNGKEAAVIPIEMGYGHWTVLVAKY------DKKDNQIILTFNDSLINYDGQKLPKLIDKTLGNLPNKP----------------IIIDEQTKQQ---TDQSACGVFTVDNGIKIAKGQAILSTEESK-----GEKGLRLREHHAQILTDAMFKQDAQWIR |
10 | 4nv0A | 0.09 | 0.07 | 2.84 | 0.91 | PROSPECTOR2 | | RLRALTQDHCRMRDPAEVERIINEFVIGGSSFGIFNACQSLPDKLYHKYRPIEIDPHMPIAEKVQYMIEWWTKSGELTSGFPFDQSEIDQIASKYTHTHEFFADLQRLGIPTLVFSAGL---------GNSVVSVLRQANV-----LHPNVKVVSNFLQFRDGLLDGFQQPMIHTFNKNETVLNETSEYYDLVHTRDDSIGDADMASGVPASS---------------HIMKIGFLFDHVEANMKKYMDT-----FDIVLVDDQTMD-------------VPRTLLSLIEKQHKLNL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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