Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | PSMMQREVEDEDNKAEDDLVGEAGPQMPENEGTARHKVDALGVGGNKRKKSKSKSAPPTVINYYYAAPQRPVVQSYGTSYGGGGYGSNAYGVPRPVNSYQSQGYRAAVGNDEVDEMLRQHQTMARTINPKQ |
1 | 5v4sA2 | 0.11 | 0.11 | 3.82 | 0.97 | SPARKS-K | | EVKIQLHRDLLEKGADPALVTSLVFSMKPMIFLEGDTIFRRGEKGD---------DLYILSEGSVDILDSDEKTILLSLQEGQFFGELALVMDAPRSATTTTCEIYTLSKTDFDNVLKRFSQFRSAIEESV |
2 | 2j2892 | 0.17 | 0.15 | 4.78 | 0.51 | FFAS-3D | | -SLIEDIESKVDRAQAEKLASKLKKRQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTMKERAKPEIIKG-----------------SRKRRIAAGCQDVNRLLKQFDDMQRMMKKMK |
3 | 4aq1A5 | 0.10 | 0.10 | 3.63 | 0.77 | MUSTER | | ------VLQDIKVDATSVKLSDEAVGGGEVEGVNQKTIKVSAVDQYGKEIKFGTKGKVTVTTNTEGLVIKNVNSDNTIDFDSGNSATDQFVVVATKDKIVNGKVEVKYFKNASDTTPTSTKTITVNVVNV- |
4 | 6f2tA | 0.16 | 0.05 | 1.77 | 0.28 | CNFpred | | ---------------------------------------------------------PSFYTIYVEEP-------------------------------DSAGHKSGPVSAGVIKALQLVDDAFGMLMEGL |
5 | 1sieB | 0.20 | 0.20 | 6.36 | 0.50 | HHsearch-2 | | PKLIKGGMEVLDLVTGPDSVIEANPRMGQPPTPETEGGQYYGWSRGINLKYKEEGVKDQVLNGMYPVEIWHPDPAYFGNYTGGTTTTNENGVGPYMGWRVYDVWRRWVKNPPMASLISSLFNLPQVQGQTQ |
6 | 4cfiA2 | 0.16 | 0.12 | 4.08 | 0.87 | Neff-PPAS | | -----------------------MVQTGQTLGTIKVAIDSSGAAWSS----GSTGQETTQINVVSDGKQALSSTAVTAVFGSSTAGTGTAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKP-- |
7 | 3rj1B | 0.17 | 0.15 | 5.04 | 0.53 | HHsearch | | LYQIKKELISYGVSIENNKVELPNEKFQDLPKINDKRANLLVLRVIFKKRSRI-SSPHPILGKVRFANGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEVEDFLHFIVAEYIQQKK---------- |
8 | 5tx1R | 0.10 | 0.09 | 3.38 | 0.68 | SP3 | | ---MNGTGGAFEGGLFSPYL---TTRLPGWAGV-RQNVMGSTVDGRPVLPANSSTMT-----YATVGNSSLDSTAAAAAAAAAMTATRLASSYMPSSGSSPSVPSSIIAEEKLLALLAELEALSRQLAALT |
9 | 5tx1R | 0.08 | 0.08 | 2.97 | 0.62 | PROSPECTOR2 | | MN-------GTGGAFEGGLFSPYLTTRLPGWAGVRQNVMGSTVDGRPVLPANSSTMTYA-----TVGNSSLDSTAAAAAAAAAMTATRLASSYMPSSGSSPSVPSSIIAEEKLLALLAELEALSRQQQQNK |
10 | 6f1te | 0.17 | 0.15 | 5.00 | 0.48 | FFAS03 | | -CMYDHKTFSEILNRVQKAVDDLNLHSYSNLPIWVNKLD-LQAGLRAWTQVLLGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSYSAVMG-SEVEQYVK------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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