>PF04611 (145 residues) MAELLACLQSISAHAKDMMALARSRGATGSRPTPTTLPHFDELLPPNLDFVRTRLQEARL PPKAIKGTLSAYESACARWKHDLEEAFDRTAHSISPHNFQRLAQLRTRLYVEQVQKWLYE VLQVPERWKAEMEKQRAHINATMGP |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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Seq | MAELLACLQSISAHAKDMMALARSRGATGSRPTPTTLPHFDELLPPNLDFVRTRLQEARLPPKAIKGTLSAYESACARWKHDLEEAFDRTAHSISPHNFQRLAQLRTRLYVEQVQKWLYEVLQVPERWKAEMEKQRAHINATMGP | |||||||||||||||||||
1 | 5j5kA | 0.09 | 0.08 | 3.19 | 0.70 | SPARKS-K | AATILSDLSTIKTDINTLTQHFNEFTGD-----LLQALAAQAVEQQLESDIDQATADAKLSAADSTSVTNALLGL-KPDIVTSLDAIVAKKPQVDSAGVGSLVLSDLNALQSKTDALSGALQDITATDKDTIASGTQDIDAAFSS | |||||||||||||
2 | 3pdyA | 0.13 | 0.11 | 3.80 | 0.89 | FFAS-3D | -DSTLRYLQDLLAWVEENQHRVDGAEWGV-----------------DLPSVEAQLGS----HRGLHQSIEEFRAKIERARGRLDLQYAKLLNSSKARLRSLESLHSFVAAATKELMWLNEKKESYSALMRELELKEKKIKE---- | |||||||||||||
3 | 4p1nA | 0.13 | 0.10 | 3.34 | 0.28 | HHpred | DSNITPFVESLSAKAFVMYSFAEMKFSQILNLIPAP-------------EL----------KKLCMESLLLYLKSLTILASSMKLTSKWWYENKNCTL-------KLNILVQWIRDRFNECLDKAEFLRLKLHTLNQ-------- | |||||||||||||
4 | 5xuaA | 0.10 | 0.10 | 3.57 | 0.89 | MUSTER | MQEPLTKERLISDWNSNVSVAVARTTAIAKSSDASLVQFLAA----DAAATTKSTANVQIEPLITQPAEREILDKIMQVRKTYIASRDKVSQLKADGMAEEAESTLINSYVPAAQGYLKLLGELLNLQRASLDAKAAEVEQIE-- | |||||||||||||
5 | 2nrjA | 0.07 | 0.07 | 2.86 | 0.60 | CNFpred | MKETLQKAGLFAKSMNAYSYMLIKNPDVNFEGITIGYVDLPGRIVQDQKNARAHAVTWKVKKQLLDNGIVEYDTTFDNYYETMVEAINTGDGETLKEGITDLRG-EIQQNQKYAQQLIEELTKLRDSIGHDVRAFGSNKELLQSI | |||||||||||||
6 | 2nvoA4 | 0.19 | 0.10 | 3.12 | 0.41 | HHsearch-2 | -----NGLTWLLRNLGNLGRV----GV------------LTPN-DSTVQAVIEALKRGRIHPLDALKARLVYAQGQPRVVDALEEAFTLAFGNVQP------------------------------------------------- | |||||||||||||
7 | 5xuaA | 0.11 | 0.10 | 3.77 | 0.80 | Neff-PPAS | MQEPLTKERLISDWNSNVSVAVARTTAIAKSSDASLVQFLAADAAATTKSTANVLKQ--IEPLITQPAEREILDKIMQVRKTYIASRDKVSQLKADGMAEEAESTLINSYVPAAQGYLKLLGELLNLQRASLDAKAAEVEQIE-- | |||||||||||||
8 | 3thgA | 0.15 | 0.08 | 2.77 | 0.60 | HHsearch | -----------------------------------------PFTREDIGVCKGIFRTDNVADDDIVK---------------LVDTFPG-------QSIDFFGALRARVYDDEVRKWVSEV-G-VDTIGKKLVNSKEG-PPSFE- | |||||||||||||
9 | 5xuaA | 0.10 | 0.10 | 3.57 | 0.68 | SP3 | MQEPLTKERLISDWNSNVSVAVARTTAIAKSSDASLVQFLAA----DAAATTKSTANVQIEPLITQPAEREILDKIMQVRKTYIASRDKVSQLKADGMAEEAESTLINSYVPAAQGYLKLLGELLNLQRASLDAKAAEVEQIE-- | |||||||||||||
10 | 2liga | 0.12 | 0.10 | 3.65 | 0.67 | PROSPECTOR2 | MQSELTSTWDLMLQTRINLSRSAARMMMDASNQQSSA------KTDLLQNAKTTLAQAMTPLPAMAEASANVDEKYQRYQAALAELIQFLDN----GNMDAYFAQPTQGMQNALGEAL-----------GNYARVSENLYRQTFD | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |