Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | IVIDITLAGLFWAWGADEDILQRLVKKTLYIGFFAFIITNFTKLSGIIFNSFAGLGLKAGGSSISTADFLRPGRLAQVGLDAGQPLLDSASQMMGFTSFFSNFVQIAVLMVSWLLVLIAFFILAVQLFVTLIEFKLTTLAGFILIPFALFNKTAFLAEKVLGNVVASGVKVMVLAVIVGIGTGLFSQFTTAYAGGQPTIEQALSVVLAALAMLGLGIF |
1 | 6cc4A | 0.10 | 0.10 | 3.56 | 1.04 | SPARKS-K | | DKFALTSQLLKITF-----PYILLISLASLVGAILNTWFSIPAFAPTLLNISMIGFALFAAPYFNPPVLALAWAVTVGGVLQLVYQLPHLKKIGMLAGAMRVVKQMGPAILGVSVSQISLIINTIFASWMYYADRLMEFPSGVLGVALGTIEYNRLMDWGLRLCFLLALPSAVALGILS---GPLTVSLFQYGKFTAFDALMTQRALIAYSVGLIGLI |
2 | 3vvnA1 | 0.10 | 0.09 | 3.40 | 1.29 | FFAS-3D | | ---------------KTTKGVQDPKKAIVRLSIPMMIGMSVQTLYNLADGIWVSGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDKEGADNVAVHSLILSLILGVTITITMLPAIDSLFRSMG-AEAVELAIEYARVLLAGAFIIVFNNVGNGILRGEANRAMLAMVLGSGLNIVLDPIFIYTLGFGVVGAAYATLLSMVVTSLFIAY |
3 | 3rkoC | 0.08 | 0.08 | 3.10 | 1.11 | CNFpred | | MVVLTGLLGVLAVLC-YQGFFHLNLMWILGGVIGVFLAIDMFLFFEMMLVPMYFLIALWGHKATRITAATKFFIYTQASGLVMLIAILALVFVHWTFNYE-LMLGFFIAFAVKMPVWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMATSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF |
4 | 4ikvA2 | 0.10 | 0.10 | 3.59 | 1.06 | Neff-PPAS | | ILGIIIPIIYFVVMYRSPKTTAEERSRVIAYIPLFVASAMFWAIQEQGSTILANYADKRTQLDVAGIHLSPFQSLNPLFIIILAPVFAWMWVKLGKRQPTIPQKFALGLLFAGLSFIVILVPGHLSGGGLVHPIWLVLSYFIVVLGELCLSPVGLSATTKLAPAAFSAQTMSLWFLSNAAAQAINAQLVRFY--TPENETAYFGTIGGAALVLGLILL |
5 | 5t77A | 0.12 | 0.11 | 4.09 | 0.94 | SPARKS-K | | LSYFFPELIINLFGAGSSHETKILAKKLLLITSPSIYFIFLWAISYSILNTPALTPSISNITIIIGTFLSGIISPTIGFLIGSILMFFKSIIKHKLKLFFPTFMTMVVSQINTVVDMNVVSLQYASRFYLLPYGLFAVSVSTVVLSKISNDNFNYHLNDALKTTLFFTIPSMVGLIFLS--TPIIRFFYEHGAFTSKDTLITSKILIAYTPFYGIYST |
6 | 6idpA1 | 0.09 | 0.08 | 3.00 | 1.29 | FFAS-3D | | -----------------QTSTSSLAKQLFQMTWPMLFGVLSLMSFQLVDSAFIGQVLPLAAQGFTM-------PIQMVIIGIQVGLGIATTAVISRAIGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLLRQPLLVFAIIDHYWLWWLASAWTGAMLYFYYSVCRANTLLPGTLMMVTSVLNLILDPIFIFTFDLGIDGAAIATIIAFGVGIAIVAP |
7 | 5tj5A | 0.14 | 0.12 | 4.24 | 0.26 | HHpred | | -GFLMTLAALSLVLNEKGEIFDMAFT--GRYIILLMGV--FSMYTGFLYN----------GTENLFSNSYKLSIFIHMTYSYFFSLANHLDI---IGNFIPGLL-FMQGIFGYLSVCIVYKWMLINMFLAKVQ-VFLLLMALVCIPWLLLV--KPLHDIMIHQVIHTIEFLWALSLAHAQLSSVLWTMTIQIAFGFRGFVGVFMTVALFAMWFALTCA |
8 | 3vvnA1 | 0.12 | 0.11 | 4.06 | 0.90 | MUSTER | | -------KTTKGVQLLRGDPKKAIVRLSIPMMIGMSVQTLYNLADGIWVSGLGPESLAAVGLFFPVFMG--IIALAAGLGVGTSSAIARRIGARDKEGADNVAVHSLILSLILGVTITITMLPAIDSLFRSMGAEAVELAIEYARVLLAGAFIIVFNNVGNGILRGEGANRAMLAMVLGSGLNIVLDPIFIYTLGFGVVGAAYATLLSMVVTSLFIAY |
9 | 3rkoB | 0.10 | 0.10 | 3.59 | 1.08 | CNFpred | | VGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFR-MLMWATLMLLGGAVGKSATWLADAMAGPTPVSALIHAATMVTAGVYLITHGLFLMTPEVLHLVGIVGAVTLLLAGFAASTMSQIGYMFLALG--VQAWDAAIFHLMTHAFFKALLFL |
10 | 6r6bI | 0.10 | 0.04 | 1.37 | 0.72 | HHsearch-2 | | ---------------------MSDIVYMGNKALYLILIFSLWPVGITVIGLSIGLLQTVTQLQE---QTL-------------------------------------------------------P-FGIKIGVSISLLLSGWY-GEVLLSFCHEIMFLIKSG------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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