Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | LTRANAILAYTLSVSACLTFCCFLSTVFIDYRANATLNTVKVVVKNVPDYSASREKNDLGFLTFDLQTDLSPLFNWNVKQLFLYLTAEYRTETNEINQVVLWDKIVLRGDNAVLDFKNMNTKYYFWDDGNGLRGNKNVTLTLSWNIIPNAGFLPSVSAHGSHTFSFPA |
1 | 6beaA3 | 0.12 | 0.10 | 3.61 | 0.67 | SPARKS-K | | LQGFDGDATDNITLADSNIINGGIETIVTAGNKT-GIHTVNLNIKD-GSVIGAANNKQTIYASASAQGAGSATQNLNLSTIYSDVLALSESENSASTTTNVNMNVAR----SYWEG-----NAYTFNSGDKAGSDLDINLSWKGKV----------SGAGDASVSLQN |
2 | 5tfyI | 0.13 | 0.11 | 3.72 | 0.48 | FFAS-3D | | ----AAIVLIAFVVVAAVFSYVMLGAGFFATQKTSNLILDGMIYGSYSK---GGSGLAQLYFYVKVPEGGETQ---DLKYVTYLWTKENKAVTTLTSI-TPTNQQLNPGARVKVTIT--------APTGYKPIAGQKFVLEIK----PKTG------ASTIVTRTLSD |
3 | 2dmhA | 0.12 | 0.08 | 2.73 | 0.21 | HHpred | | -----------------------------GSSGMLRVIVES-----ASNIPKTKFGKPDPIVSVIFKDELNP--VWNEI--LEFD---LRGIPSSSLGIIVKDFETIGQNKATVALKDLTGDISLLNEKGQDTG-A--TIDLVIGYDPPSGP---------------- |
4 | 6mjpC | 0.12 | 0.11 | 3.79 | 0.80 | MUSTER | | LSRIVYVLLLFIASWSLYYLLGQEQDSKIQVAPNL--ELPMFSGENLENISYDEQG----IRNYVITSIHLDHYAKSGNTLFKAPILKVYREGT-LQEWEITRRGILSKDQ-VLTLYD---DVLAKNLLPD-SGFDTLTTEMSIQL--KSRDFWA---DKPVELRGPQ |
5 | 2bi0A | 0.07 | 0.04 | 1.48 | 0.61 | CNFpred | | -----PLAHPGLVCDVAIGQSTLATQRVK-----ANLFYRGLRFHRFP-------VGDTLYTRTEVVGLRAN-----APTGLAGLRMTTIDRDRLVLDFYRCAMLPAS------------------------------------------------------------ |
6 | 2qqpG2 | 0.18 | 0.05 | 1.75 | 0.42 | HHsearch-2 | | --------------------------------------------------------------------------------------------------------------------ERFSASMTVSASNAIFQP-SNTVARIVWSITPLPKFFSVEIDNSVWTFTAPA |
7 | 6n2bA1 | 0.10 | 0.10 | 3.54 | 0.77 | Neff-PPAS | | -----RIQTQGEFKAIGVNNLICKGPEVIVNGGGNSIEIKEIMYIQNKLVFNGAPNTNPNTLNANKIMELNGYGYYKANEIYSDGEVQVKNYGNFEIGSIGIVKKLTVTDNGRTTIKSGATLYCDQLENGRVFIEAGATLVTRAISISGGTIEGPGTRQVNPSATFPS |
8 | 2hfqA | 0.22 | 0.08 | 2.64 | 0.34 | HHsearch | | ------------------------------------------------------------------------------------------------MQIHVYDTYVKAKDGHVMHFD-VFTD-VR-DDKKGEEG-ATVTSE--ECRFCHSEKAPDEVIEKQFIYKME- |
9 | 2c1gA1 | 0.09 | 0.06 | 2.30 | 0.62 | SP3 | | ---------------FEQKIESLKKEKDDQLSEGNQKEHFRQGQAEVIAYYPLQGEKVISSVRELINQDVKDKLE-SKDNLVFYYTEQEESGLKGVVNRNVTKQIYDLVAFKIEETEKTSGKVHLTEDGQPF------------------------------------ |
10 | 4mboA2 | 0.06 | 0.05 | 2.10 | 0.62 | PROSPECTOR2 | | -------------------------------NSPSVTEHTNVKTNVRSRIMKLDDERQTETYITQINPEGKEMYFASLGNLYTIIGSDGSPVNLLNAEVKILKTNSKNLTDSMDQNYDSPEFEDVTSQYSYTNDGSKITIDVVLVKIPQSGVLYNQTYGSKYSYGHTN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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