Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MNYVYYIFNNVKYLYNSMNSATLSGAIDVIVVEQPDGTMLSTPFHVRFGKYGVFNYDDKYVDIQINNEEIDLKMKLGENGVAFFVEKPSDETELPSHLETSP |
1 | 2fugQ | 0.08 | 0.08 | 3.06 | 0.77 | SPARKS-K | | ERELYEAWVELLSWMREYRPYDLPTTIMTASLSDGLGEP------FLLADVSPRHAKLKRIGLRLPRAHIHLHAHYEPGKGLVTGKIPLTKERFFALADRAR |
2 | 1e3vB | 0.13 | 0.13 | 4.40 | 0.46 | FFAS-3D | | -QEVQGLMARYIELVDVGDIEAIVQMYDATVEDPFGQPPIHGREQRACLTGPVRASHNGCGAMPFNGQPCALDMRFDEHGRIQTMQAYWSEVNL---SVREP |
3 | 4aw7A2 | 0.13 | 0.11 | 3.73 | 0.27 | HHpred | | -----------NKYYSSYLKPSAGSSLSFP-FTGIES--GSGRASLRMS-IGRPVSASKKPVVKINGTAVSVPDNWKGGRNIFFGMIE---VPFDIQLLKN- |
4 | 4aq1A3 | 0.17 | 0.17 | 5.48 | 0.79 | MUSTER | | VDNLSNAPQNTVAFNKAEKVTSMFAGETVAMYDTKNGDPETKP--VDFKDATVRSLNPIIATAAINGSELLVTANAGQSGKASFEVTFKDNTKFTVDVKKEP |
5 | 3ttsA | 0.10 | 0.08 | 2.93 | 0.67 | CNFpred | | ADFLQGLIANLCEEQGVKPLLNTPDGVEVAERVKN---GTSYLFVMNHN-EMTFDAGASRQRDLLTGKTISGQATIPARGVMILERA--------------- |
6 | 3rfzB1 | 0.16 | 0.08 | 2.62 | 0.39 | HHsearch-2 | | ---------------------------------------------------QELPPGTYRVDIYLNNGYMARDVNTGQGIVPCLTRAQLASMGLNTASVADA |
7 | 4aq1A3 | 0.15 | 0.15 | 4.96 | 0.95 | Neff-PPAS | | -DNLSNAPQNTVAFNKAEKVTSMFAGETKTVAMYDTKNGDPETKPVDFKDATVRSLNPIIATAAINGSELLVTANAGQSGKASFEVTFKDNTKFTVDVKKEP |
8 | 5aj3a3 | 0.17 | 0.10 | 3.23 | 0.54 | HHsearch | | DKILEG-TETAKYVFTDISY-SIPHRERFIVVREPSGTLRKASWEERDRMIQVYFPREGRI----------------------------------------- |
9 | 3nthA1 | 0.12 | 0.09 | 3.15 | 0.62 | SP3 | | VPALEQMTDKLLDAEQDLPAFSDEG--ALCVAQPEDEV------FYRAQIRKVLDDGK-------------CEVHFIDFGN---NAVTQQFRQLPEELAKPA |
10 | 4aq1A3 | 0.15 | 0.15 | 4.97 | 0.53 | PROSPECTOR2 | | EVPLSNAPQNTVAFNKAEKVTSMFAGETKTVAMYDTKNGDPETKPVDFKDATVRSLNPIIATAAINGSELLVTANAGQSGKASFEVTFKDNTKFTVDVKKEP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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