Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | QGQQKGEGKSEKQGKSEGEGKRQGEGKHDSQAKPASEARAAEKRPAEDYVPRKAKRKTDRGTDDSPKNSQEDLQDRHVSSEEMMRECADVTRAQEELRKRQKMGGYHWMPRDAQDALVPR |
1 | 3hgfC | 0.13 | 0.09 | 3.20 | 1.00 | SPARKS-K | | -------------KKIENIVTKIDKKKYIYK-KLLNEIAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKIKK------KSENMIKSMEK---------YIKDLDEIKEQSPKAEMN---- |
2 | 1w9rA | 0.14 | 0.12 | 4.29 | 1.25 | MUSTER | | -GSHMPEKKVAEAEKKVEEAKKKAE---------DQKEEDRRNYPTNTYKTLELEAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAAE |
3 | 2otoB | 0.07 | 0.07 | 2.80 | 1.28 | Neff-PPAS | | KDLKARLENAEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLEK |
4 | 5yfpE2 | 0.04 | 0.03 | 1.80 | 1.00 | SPARKS-K | | -----------FIKNVKFKEQLIDFENHSVIIETSMQNLINDVETVIKNESKIVKRVFEEKATHVIQLFIQRVFAQKIE-PRFEVLLRNSLSILAYVRILHGLFTLFGKFTKSLIDYFQL |
5 | 2cseW | 0.24 | 0.20 | 6.25 | 0.47 | FFAS-3D | | --------PRKTKGKSPATTEPGTSNREQYRARPASVQRATES-------AELPMKNNDEGTPDKKGNTRGDLVNEH---SEAKDEADEATQKQAKDTDKSKAQVTYSDTGINNANELSR |
6 | 4uzyA3 | 0.20 | 0.08 | 2.66 | 0.28 | HHpred | | --------------------------------------------------------------SPDLYDYLQAAIGRYKSPEEAFRRFDELATRVEQLRRLKQIQDARI-ARD-------- |
7 | 2pmsC | 0.11 | 0.10 | 3.59 | 1.05 | MUSTER | | SHMDAEEVAPQAK--AELENQVHRLEQELKEIDEAPLQSKLDAKKAKLSKLEELSDKIDE-LDAEIAKLEDQLKAAEEEDYFKEGLEKTIAAKKAELEKTEADLKKAVNE---------- |
8 | 3o4xE | 0.37 | 0.08 | 2.48 | 0.37 | CNFpred | | --------------------------------------------------------------------------------ENIKPEIVSVTAACEELRKSENFSSLL------------- |
9 | 4cc9B | 0.13 | 0.08 | 2.90 | 0.45 | HHsearch-2 | | -----------------------------------------RERIPPGNSGEETIGEAFDWLDRTVEEINRA-AVNHLPRELIFQVHDEMYTKYRYLCLIQKAMFMHCKKRCLRPGPPPP |
10 | 5appA | 0.09 | 0.09 | 3.47 | 1.23 | Neff-PPAS | | -KQIEDKIEEILSKIYHIENEIARIKKLIQNVDVRSTENAARSRANEQKIAENKKAIENKADKADVEKNRADIAANSRAIATFRSSSQNIAALTTKMKQIEDKIEEILSKIYHIENEIAR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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