>PF04528 (145 residues) LASWFRMVVDGAMFNQRFIWYREVVNYNMPKEVMFMSSVFMRGRHLIYLRLWYDGHVGSV VPAMSFGYSALHCGILNNIVVLCCSYCADLSEIRVRCCARRTRRLMLRAVRIIAEETTAM LYSCRTERRRQQFIRALLQHHRPIL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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Seq | LASWFRMVVDGAMFNQRFIWYREVVNYNMPKEVMFMSSVFMRGRHLIYLRLWYDGHVGSVVPAMSFGYSALHCGILNNIVVLCCSYCADLSEIRVRCCARRTRRLMLRAVRIIAEETTAMLYSCRTERRRQQFIRALLQHHRPIL | |||||||||||||||||||
1 | 4glkA | 0.10 | 0.08 | 3.10 | 0.62 | SPARKS-K | ---------GTLRFFTVTDEYIAYLR-KFESKVHYVGVVLKKNNYFIPLLSYNPEKDKAMKKRSRI--VTRLFEIGNPLGYLLHLDLKKMMQKQLIYMKSKIENKSEVVYRKAAHE------KDGYYLKFKLLEAKATLYSKK-- | |||||||||||||
2 | 1is1A | 0.09 | 0.08 | 3.18 | 0.55 | FFAS-3D | INEIKKDAQE--RMDKSVEALKNNLSKVRTGRAHPVANVVAEDARTLAITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLEGGRVAVRNIRRDANNDLKALLKDKEISEDEDRKAQEEIQKLTD------ | |||||||||||||
3 | 2ashA1 | 0.13 | 0.11 | 3.86 | 0.25 | HHpred | --RDLEEAAEIILSNTFHLMLKNFMGW--KRPILTVFSIDDEGVVFRKVFLNPEISMEVQ-IALGSDIC----------MVF--DHCPVADYEEVKEATERTYRWALRSKKAFKTENQGIVQGGIYPDLRRESALQLTSIGFDG- | |||||||||||||
4 | 3kaqA | 0.10 | 0.09 | 3.30 | 0.66 | MUSTER | IAQKLEELVAAGGHEVTLLNAAEASADNLADGVLMGCSAWGMED------LELQDDFAPLFDEMENMG------LKGKKLAAFASGDMEYEHYC--GAVPAIEEKARGLAEVICEGLKIEGDASSDPDAVSAFAEDVLKK---L- | |||||||||||||
5 | 5x3vA | 0.12 | 0.11 | 3.92 | 0.71 | CNFpred | CTPMFREYSLQVLKNA--RAMADALLER---GYSLVSG--GTDNHLVLVDLRPKLDGARAERVLE-LVSITANKNTPGGLRLGAPALTQFREDDFRRVVDFIDEGVNIGLEVKSKTFKSFLLDSETSQRLANLRQRVEQFARAFP | |||||||||||||
6 | 5b7iA2 | 0.15 | 0.06 | 2.10 | 0.53 | HHsearch-2 | ----------------------------------------------------------------------------SEFNILLVSQCE-------KRALSETRRILDQFAERRGERTWTPITQAGLDTLR-RLLKKSARRNTAVA | |||||||||||||
7 | 1ukzA | 0.06 | 0.06 | 2.64 | 0.63 | Neff-PPAS | QCEKLVKDYSFVHLS-AGDLLRAEQGRAGSQYGELIKNCIKEGQIVPQEITLALLRNAISDNVKANKHKFLIDGFPKFILFFDCPGRSDDNIESIKKRFNTFKETSMPVIEYFETKSKVVRCDRSVEDVYKDVQDAIRDSL---- | |||||||||||||
8 | 1xv3A | 0.17 | 0.06 | 1.81 | 0.39 | HHsearch | ---------------------------------------------------HSSGYTRPL-RK-PSR------PI--FIRPIGCDVCYGIPSSTARLCCFRYGDC-------CHL------------------------------ | |||||||||||||
9 | 5zkpA2 | 0.08 | 0.07 | 2.74 | 0.70 | SP3 | TAETIARELADAGYEVDSRDAASVEAGGLFEGVLLGCSTWGDD------SIELQDDFIPLFDSLEET------GAQGRKVACFGCG--DSSWEYFCGAVDAIEEKLKNLAEIVQDGLRIDGDPRAARDDIVGWAHDVRGAI---- | |||||||||||||
10 | 4lgwA | 0.06 | 0.06 | 2.49 | 0.51 | PROSPECTOR2 | FFSWRRTMLLRFQAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTQPLWEAARAHGLRRGVTQYLMLPNRALFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNPNKTQVACYAAATGLILE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |