>PF04503 (309 residues) EHSSEAKAFHDYGFVNSGYGVNGIAHNAGPAPSPLGQMPPNDGMPGGPMPPGFFQNNSTM RPSPPTHPSSQPSPQHPQPPPPPHSQMMSTQFMGPRYPAGPRPGVRMPQMANDFNGPPGQ PMMPNNMDPTRQGPPGMNPMNPRMNPPRGPGMGPMGPGSYGPGMRGPPPNSSLGPGGPGG PGMPPMSMAGPGGRPQWQPNTSAPMNYSSSSPGNYGGPPGSTGPPGPGTPIMPSPQDSSN SGGENMYTMMKPVPGGNMPGDFPMGGGPEGGPMGPMGPNTMGPVLNGDGMDGMKNSPANG GPGTPREDS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | EHSSEAKAFHDYGFVNSGYGVNGIAHNAGPAPSPLGQMPPNDGMPGGPMPPGFFQNNSTMRPSPPTHPSSQPSPQHPQPPPPPHSQMMSTQFMGPRYPAGPRPGVRMPQMANDFNGPPGQPMMPNNMDPTRQGPPGMNPMNPRMNPPRGPGMGPMGPGSYGPGMRGPPPNSSLGPGGPGGPGMPPMSMAGPGGRPQWQPNTSAPMNYSSSSPGNYGGPPGSTGPPGPGTPIMPSPQDSSNSGGENMYTMMKPVPGGNMPGDFPMGGGPEGGPMGPMGPNTMGPVLNGDGMDGMKNSPANGGPGTPREDS | |||||||||||||||||||
1 | 3hr2A | 0.18 | 0.18 | 5.79 | 1.52 | SPARKS-K | GERGGGSRGFGADGVAGPKGPSGERGSGPAG--PKGSGEAGRGEAGGAKGLTGSGSGPDGKTGPGPAGQDGRGPAGPQAGVMGFGPKGTAGEGKAGERGVGPGAVGPAGAGAQGAGPAGPAGERGEQGPAGSGFQGLGPAGPGEAGKGE--QGVGDLGAGPSGARGERGFGERGVQGPGPAGPRGNNGAGNDGAKGDTGAGAGSQGAGLQGMGE-RGAAGLGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPGPGPTGARGAGDRGEAPGPAGFAGPGADGQGAKGEGDTGVKGDAGPGPAGPAGPGP | |||||||||||||
2 | 2nbiA | 0.18 | 0.18 | 5.89 | 1.21 | MUSTER | PYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQLPYGDSSRPLDCTDPAVNRPLPTPQNINCPAFECRPDNPMFTPSPDGSPPICSPMMPSPEPSSQPSSDSARPPVLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPS-AVTVPLTPAPSS | |||||||||||||
3 | 2cseH | 0.10 | 0.10 | 3.59 | 2.66 | Neff-PPAS | ---------MEVCLPNGHQIVDLINNAFEGRVSIYSAQEGWDKTISAQPDMMVCGGAHCLGVVGSLQRKLKHLPHHRCNQQIRHQDYVDVQFADRVTAHWKRGMLSFVCQMHAMMNDVSPEDLDRVRTEGGSLVELNWLQVDPNSMFRSIHSSWTDPLQVVDDLDTKLDQYWTALNLMIDSSDLVPNFMMRDPSHAFNGVRLEGDARQTQFSRTFDSRSHDPSKGRAYRKELVTPARDFGHFGLSHYSRATTPILGKMPAVFPFIKGTAKLKTVRKLVDSVNHALGPGGMTGWYNRTMQQAPLTPAALT | |||||||||||||
4 | 2nbiA1 | 0.15 | 0.15 | 5.10 | 2.27 | PROSPECTOR2 | QPSDIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEVLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVT-VPLTPAPSS | |||||||||||||
5 | 3hr2B | 0.19 | 0.19 | 6.15 | 1.38 | SPARKS-K | AGVMGPPGNRGSTGPAGVRGPNGDAGRGEGLMGPRGLGSGNVGPAGKEGPVGLGIDGRGPIGPAGPRGEAGNIGFGPKGPSGGPDGNNGAQGPGPQGVQGGKGEQGPAGPGFQGLGPSGTAGEVGKGERGLPGEFGLGPAGPRGERGPGESGPIGIRGPSGAGPDGNKGEAGAGPGGLGERGAAGIGGKGEKGETGLRGEIGNPGRDGARGAGAIGGPAG--ASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGSAGQGAGEKGTKGPKGENGIVGPTGPVGAAGPSGPNGPPGPAGSR | |||||||||||||
6 | 2xd8A | 0.12 | 0.12 | 4.12 | 0.67 | FFAS-3D | GGATDKYALYLFGEMFKGFQHETIARDLVTKRTLKNGKSLQFIYTGRMTSSFHTPGTPILGNADKAPPVAEKTIVMDDLLISSAFVYDLDETLAHYELRGEISKKASPVSATNFVEPGGTQIRVGSGTNESDAFTASALVMDEKGVSSQGRCAVLNPRQYYALIQDIGSNGLVNRDVQGSALQSGNGVIEIAGIH---IYKSMNIPFLGKYGVKYGGTTGETSPGNLGSHIGPTPENANATGGVN-----NDYGTNAELGAKSCGLIFQKEAAGGPQVQVTNGDVSVIYQGDVILGRMAMGADYLNPAA | |||||||||||||
7 | 5yq7B | 0.32 | 0.03 | 0.78 | 0.34 | HHpred | -FNNAQWLVHDI-VVKTIYGGLIIAHV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
8 | 2nbiA1 | 0.18 | 0.18 | 5.80 | 1.18 | MUSTER | PYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPD-GRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQLPYGDSSRPLDCTDPAVNRPLPTPQNINCPAFECRPDNPMFTPSPDGSPPICSPMMPSPEPSSQPSSDSARPPVLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTV-PLTPAPSS | |||||||||||||
9 | 3k6xA1 | 0.14 | 0.02 | 0.77 | 0.49 | HHsearch-2 | ENSELATEFVALL--LGETGQQIFI-E-----------------------NGQPPIVPAIAEGK-----DSMPE--------------ELQLVV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 1maeH | 0.07 | 0.07 | 2.77 | 2.61 | Neff-PPAS | ---------------------SASAAAAAAAAALAAGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPASSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |