Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | HDQENWVRLSELIPEDVKKPLEKLDLQLTCIESDNSLPHDPPEIQSITTELICITAKSDNSIPIKLNSELLMNKEKLTSIKALYDDFHSKICEYETKFNKNFLELNELYNMNRGDRRPKELKFTDFITSQLFNDIESICNLKVSVHNLSNIFKKQVSTLKQHSKHALSEDSISHTGNGSSSSPSSASLTPVTSSSKSSLFLPSGSSSTSLKFTDQIVHKWVRIAPLQYKRDINVNLEFNKDIKETLIPSFESCLCCRFYCVRVMIKFENHLGVAKIDIPISVRQ |
1 | 1vt4I | 0.17 | 0.14 | 4.51 | 1.12 | HHsearch-2 | | EHQYQYKDILS---VFEDAFVDN----FDCKD----VQDMPKSILSKE----------------EIDHIIMSK-DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINRLYNDNQVFAKYNVSRLQPYKLRQALLEVQCKMDFKIFWLNLKNCNSPETVLEM----------------------LQKLLYQIDPNWTSRSD-----HSSNIKLRIHSIQAELRRLKSKPYENCLLVLLNVQKSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLPQDLPREVLT |
2 | 3uauA | 0.10 | 0.10 | 3.53 | 1.05 | Neff-PPAS | | --KKYENQLNQTVKQEIASLSQDSGIKIEFSDFKCNADGDFIACLSPNFKTLAKDNNDEYNIKIRSNEIYKGETNTSISIKEYYNDLFKNQKSIQSNLVFEDFKLGEKVVSDINASLFQQ-------DPKISSFINKLSSDSYTLSFDNSINKQE-NNYLDNLDIKFYNAKLNFNTNLNINLKEDLLNYLDSKGIKFNTQTLAMDEQAINELLNSDFSNTIQKYIILNNFKIDSTLKTEQNEEQALIFDLNNITQNDDYKLNLDLKFKNSTQGIDSIEKLSINN |
3 | 1vt4I | 0.17 | 0.14 | 4.52 | 1.32 | HHsearch | | MDFEHQYQYKDILSVFEDAFVDN----FDCKD----VQDMPKSILSK----------------EEIDHIIMSKD-AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINRLYNDNQVFAKYNVSRLQPYKLRQALLELQCKMDFKIFWLNLKNCNSPETVLEML----------------------QKLLYQIDPNWTSRS-----DHSSNIKLRIHSIQAELRRLKSKPYENCLLVLLNVQNSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTQDLPREVL- |
4 | 2z6bD | 0.11 | 0.10 | 3.67 | 0.77 | SPARKS-K | | DSYDAWS-------NNRFVELTTLTMRDSLQFYDSKNIHTKMDGNEI-IQISVANANDINIIAIELGTIHSIENLKFRPFFPD---AGESIKEMLGVIYQDR-----------TLLTPAINAINAYVPDTFENYLSYVREVSDKFVFVMGVNMMDYDMMINQEPYPMIVGEPSQELKYPLAYDFVWLTKSNPFLDSSIPMITTGKGENSIVVSSGAYSEMTYRNGAQYDGYAKCSTIGNFNLTPGVKIIFQ--FKTEFYVDEVIHELSNNNSVTHLYMFTNATK |
5 | 5wj5A1 | 0.11 | 0.08 | 2.90 | 0.59 | FFAS-3D | | -------------------------------------------------------------KPCKLMLQVV----KILVVTVQLILFGLSNQLAVTFREENTIAFRHLF--LLGYSDGADDTFAAYTREQLYQAIFHAVD---QYLALPDVSLGRYAYVRGGGDPWTNGSGLYYHRGHVDPANDTFDIDPMVVTDCIQVDPPERPPPPPSSYKNLTLK-----FHKLVNVTIHFRLKTINLQSL-INNEIPDCY---TFSVLITFDNKAHSGRIPISLETQAH- |
6 | 1cf1C | 0.14 | 0.11 | 3.82 | 0.42 | HHpred | | --------------DPELVKGKRVYVSLTCAFRYGQEDIDVM-GLSFRRDLYFSQVQ-VFPPV---G-----ASGATTR----LQ------ESLIKKLGANTYP------------------FLLTFPDYLPCSVMKSCGVDFEIKAFATIPKVQHAPR-DMGPQPRAEASWQSDKPEIYYHGEPIPVTVAVTN--------STE-KTVKKIKVLVEQVTVLYSSDYYIKTVA-AEEAQEKKTLTLVPNLASSTIIKSYQIKVKLTVSGLLSEVATEVPFRLMH |
7 | 1jkyA3 | 0.10 | 0.09 | 3.36 | 0.69 | MUSTER | | SRYEKWEKIKQHYQHWSDSLSEEGRGLLKKLQIPIEPKKD--IIHSLSQEEKLLKRIQIDSS--------FLSTEEKEFLKKLQIDIRDSL---------SEEEKELLNRIQVDSSNPLS---------EKEKEFLKKLKLDIQPYDINQRLQDTGGLIDSPSINLDVRKQYHQSIGSTLYNKIYMNINNLTATLGADLVDSTDNTKINRGIFNEFKKNFKYSIPALDNERLKWRIQLSPDTRAGYLENGK--ILQRNIGLEIKVQIIKQSEKEYIRIDAKVV- |
8 | 4k1pA | 0.11 | 0.05 | 1.65 | 0.57 | CNFpred | | KLREDIKRIQGEIQAELTTILEIIKGSINIGKQ---------VFTITTKTIDFVSIG-------TLSNEIVNADSQTREAALRIQQKQKELLPLIQKLSQTEAEATQITFVED---------QVSSFTELIDRQITTLETLL---------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 2pffB | 0.13 | 0.11 | 3.82 | 1.08 | HHsearch-2 | | HAVKTKELIKNYITA-------RIMAKRPFDKKSNSA--LFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHLLSIPISCLIGVIQLAHYVVTAKLLGFTPGELRSKGATGHSQETDSWESFLPPSILEDSLENNEGVLSISNLT-QEQVQ--------DYVNK----------------TNSHLPAGKQVEISLVNGAKNLVSLYGLNLTLRKGLDQSRIPFSERKLKFSNRFSPFAKDIQIPVYDTFDGSDLRVLSLPVKWETT---TQFKATHILDF |
10 | 1jkyA3 | 0.08 | 0.07 | 2.69 | 0.94 | Neff-PPAS | | SRYEKWEKIKQHYQHWSDSLSEEGRGLLKKLQI-----------------------------PIEPKKDDIIHSLSQEEKELLKRIQIDSSDFLSTEEKEFLKKLQIDIRDSKELLNRIQVDSSNPLSEKEKEFLKKLKL-DIQPYDINQRLQDTGGLIDSPSINLDVRKQYKRHQSIGSTLYNKININNLTATLGADLVDSTDNTKINRGIFNEFKKNFKYSIPALDNERLKWRIQLSPDTRAGYLENGK-LILQRNIGLEIDVQIIKQSEKEYIRIDAKVV- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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