Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | WLVRRLGLQNRQGGRLLKVVSSLMVGQRERVVLVEIGDTWLLLGVGAGQVNTLHTMAAQHAPDASPKVDDTDPDTFANRLRQSL |
1 | 2h0hB1 | 0.06 | 0.05 | 2.14 | 0.86 | SPARKS-K | | --EELPAPVKAIEKQGITIIKTFDAPGGMKGYLGKYQDMGVTIYLTP---------DGKHAISGYMYNEKGEN-LSNTLIEKEI |
2 | 3dd6A2 | 0.15 | 0.14 | 4.80 | 0.50 | FFAS-3D | | ----RVDGREKTELRHIH-IHTNYLKHPEGSVLIEVGDTKVICSATKGWVTAEYAMIPRATEQRTIRESSGKVTGRTMEIQRLI |
3 | 1zh1A2 | 0.17 | 0.12 | 3.90 | 0.31 | HHpred | | -------------------RALWRVAAEEYVEVTRVGDFHYVTGMTTDNVKCPCQVPAPEFFTEVDGAPACKEVTFL------- |
4 | 4xfvA | 0.11 | 0.11 | 3.89 | 0.74 | MUSTER | | FAPWIYDASGRKREIATWHEFSRPQIHGYDMICVETVTDTRFVSGGDEKILRSFDLPKGVAGMVGIQFEEECPPMEDQLQRHLL |
5 | 5vbaA | 0.18 | 0.13 | 4.27 | 0.75 | CNFpred | | SMVDTLS------RPDRTLEARWWRR-MVRFVVARKDDRHVIAVRN-GDLLVLQLVAPQ--------------VGLAGMVTAVL |
6 | 1zh1A2 | 0.18 | 0.15 | 5.02 | 0.38 | HHsearch-2 | | -----------PAPNYSRA--LWRVAAEEYVEVTRVGDFHYVTGMTTDNVKCPCQVPAPEFFTEVDGPAKPEEVTFLVGLNQYL |
7 | 4yptA1 | 0.07 | 0.06 | 2.43 | 0.76 | Neff-PPAS | | -ARVFVQANMDCLPTDWRLVNKFDSVDGVRTIKYFECPGGIFVSSQGKKFGYVQNGSFKEAS--------------VSQIRALL |
8 | 1zh1A2 | 0.17 | 0.14 | 4.69 | 0.66 | HHsearch | | ----------PAP-NYS--RALWRVAAEEYVEVTRVGDFHYVTGMTTDNVKCPCQVPAPEFFTEVDGAPACKLRTFLVGLNQY- |
9 | 5htlA2 | 0.08 | 0.07 | 2.87 | 0.75 | SP3 | | ---PVIDLSRAHDIDAVPLLPEVHA-RRLRALVIGRSGDTLRIASDPADLFAQEAL-LNQLPDYGFEFVIAPEKQLVDGFDRYY |
10 | 3x37A | 0.15 | 0.15 | 5.18 | 0.44 | PROSPECTOR2 | | WSVRTLPSSLRLELDGAQVNSYEEFNKIGLRHLIHNPDKYCVLERYGNGFWIRYDVLQDLQEVEDEFTGNEHLINWAADLLPLL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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