Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MEYVALTGIAENVMRELKNDTLRTVEIRSPHNFFTALKLNVGDFVFLTHTSIQDLTSGTTGVVARIMKHQISTHRTFSSTETFYEERETTTARIQLDPRASARVRKVHSNDIGEITRV |
1 | 2hd9A | 0.11 | 0.09 | 3.39 | 0.67 | SPARKS-K | | MTYWICITN-RENWEVIKRHN--VWGVP------TLSRVKPGDKLVIYVRQEKDKEGNLLEPIYEVTSEP------YVDFSRIFKPHETYPYRVKIKPIKIGEINFKPLINDLKFIKN |
2 | 2hd9A | 0.13 | 0.11 | 3.81 | 0.51 | FFAS-3D | | MTYWICI-TNRENWEVIKRHNVWGV---PKKHKNTLSRVKPGDKLVIYVRQEK--DKEGNLLEPKIVGIYEVTSEPYVDFSRIFKPHETYPYRVKIKPIKIGEIN------------- |
3 | 5guqA | 0.12 | 0.09 | 3.29 | 0.33 | HHpred | | RKEAVIS-LWPEFAKAIVSGK-KTVEFRRRI-----PLPALSARIWIYATRP------VKSVIGFAYLEAIVQGDVLWSEQDYFEGTEATAFLLR-------DHQPI------RPIN- |
4 | 4y9vA1 | 0.11 | 0.10 | 3.69 | 0.64 | MUSTER | | TGGFYASGSHTQITTDIVKNQSQSFDVADAS------QIQKGDWLVIYCTDDFSYSPYRKGEFVEVASVSGNTVKFFGRAYDNYLTSENIVILKVNPINFKFNYLKTVSTDNNPNVPL |
5 | 2eveA | 0.12 | 0.10 | 3.60 | 0.72 | CNFpred | | -AYWLMKSE-EFSISDLQRL--GKARWDGVRNRNFLRTMAEGDEFFFYHSSCPE---PGIAGIGKIVKTAYPDPTALDPDSHYHDAKANPWSALDIGFVD--IFKNVLGL-------- |
6 | 2ar1A | 0.15 | 0.14 | 4.83 | 0.40 | HHsearch-2 | | IHYWLLKSEHKFSIDDLAKQ--KTSPWDGVRNYAAMRAMSVGDKVLFYHSNTK--EPGVAGL-AEVVRLAYDDFTALDKTSEYFDPKATPWKMVDVKFVAR--WDVLTLHELKSVQPV |
7 | 4llfA2 | 0.10 | 0.08 | 3.18 | 0.69 | Neff-PPAS | | ---ESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVP---GTYVVTIIFNSTVGGLTPSISGGGTINSSFSVSTAG-------SSAYVANITIRVNANLSLSGLTGATNAQLFAV |
8 | 1xneA | 0.12 | 0.09 | 3.27 | 0.52 | HHsearch | | MKV-YRLYLKDEYLEMVK-SGKKRIEVRVAYPQ--LKDIKRGDKIIFNDL-----------IPAEVVEVKKETDKIFPDHNMYPKWKEYGVLAIKFRVLGRDKE-------------- |
9 | 2w90B1 | 0.08 | 0.08 | 3.01 | 0.71 | SP3 | | YS-VAVYNRLREKTDEFLQEAKGK-NIVGTYSIEEFVNLEKPRKILLMVKAGAPTDA----TIEQLKPHLEKGDIVIDGGNTYFKDTQRRNKELAIHFIGTGVSGGEEGALKGPSIMP |
10 | 3rd6A | 0.07 | 0.06 | 2.48 | 0.44 | PROSPECTOR2 | | HSVIHSTPQSPDRVATVRRGDGAEFSF----------DFRVGGGEVSRFSY----GGGPEVRLDAQFQDIVPDQRIVFSYRMAIGPQPMSASLTTVELTPSGTEQGAFFDGVDSAKEL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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