Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | NRVNNIKIAAEELDGTIIEPGEIFSFNETVGRRTKEKGYKEATIFVDGEKSKGVGGGICQVSTTLYNAALEAGLKIVERHRHSREVSYVEKGKDAAVAYNSKDLRFKNTKDYPIEIKVTVTEDEIRVSIY |
1 | 5ts4A | 0.21 | 0.15 | 4.88 | 0.88 | SPARKS-K | | -MSEEAKIAIELFKEAMKDP-----FKEMCSP--------DTRIESNGQEYRG--------SEECKKFAEEMKKTEVRVERYRSD-------------GDRFEIELRVNKTFRMEIRMRKVNGEFRIEEM |
2 | 2vt8A | 0.10 | 0.05 | 1.98 | 0.49 | FFAS-3D | | -----------------------------------------------------------ALVCFLHWEVVTHGYGLGQPGPNDKKSELLPAGWNN--NKDLYVLRYEYKDGRKLLVKAITVESSMILNV- |
3 | 4l9cA | 0.08 | 0.05 | 1.80 | 0.23 | HHpred | | ----------------------------------------------------DCSDANDALIVLIHLLMLESGYIPQGTE---AKALSMPEKWKL--S-GVYKLQYMHPLGSSATLTCVPLGNLIVVNAT |
4 | 5ts4A | 0.15 | 0.12 | 3.86 | 0.82 | MUSTER | | -MSEEAKIAIELFKEAMKDPER---FKEMCSP--------DTRIESNGQEYRG-----SEECKKFAEEMKKTEVRVERYRSDG----------------DRFEIELRVNKTFRMEIRMRKVNGEFRIEEM |
5 | 2wnwA | 0.11 | 0.10 | 3.61 | 0.91 | CNFpred | | SQIRHWHTYLHDMIGNFKSGCSGFIDWNLLLGPNHQGNLCEAPIQYDAVLRR----NHSWYGIGHFCRYVRPGARVMLSSSY--------NLLEEVGFVNERVLVVYNRDVQERRCRVLDGDKEIALTLP |
6 | 2huhA | 0.11 | 0.05 | 1.65 | 0.35 | HHsearch-2 | | --------------------------------------------------------------------------RQPEVRGGDTLNAYVPEDAKA---TTPFEAYLVNDSNYYLYYTYLSAGKAWNNRSH |
7 | 5ts4A | 0.14 | 0.11 | 3.65 | 0.76 | Neff-PPAS | | -MSEEAKIAIELFKEAMK---DPERFKEMCSP--------DTRIESNGQEYRG-----SEECKKFAEEMKKTEVRVERYRSDG----------------DRFEIELRVNKTFRMEIRMRKVNGEFRIEEM |
8 | 2iiiA | 0.18 | 0.11 | 3.51 | 0.34 | HHsearch | | --------------------------AKTLGL----------HILADLYGDADKIDRVEDIRELLEGAVKYANLTKISSHYYQFQ----PHGATGVVLL----------A-SHISIHTWPEHGLATVDV- |
9 | 1j2zA1 | 0.12 | 0.11 | 3.78 | 0.71 | SP3 | | AKTAIISPKAEINKGVEIGEFCVIGDGVKLDEGV----KLHNNVTLQGHTF--VGKN-TEIFP---FAVLGTQPQDLKYKGEYSELEDNLIREFCMINPGTE------GGIKKTLIKNLLMAYHVACVIG |
10 | 4zr7A | 0.10 | 0.08 | 3.15 | 0.49 | PROSPECTOR2 | | EAENDLTQLANKVAVILENHEDQALARSITWELA-DNLTSIAIIQDEKNHWYSPNLSSITVEQIQLNKALKDHKKVSKRTGLSDT----DTDNERLIVGVP----YEKDGKKGVFLSQSLLA-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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