Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | NLRYRILEINGEEYVLDFGNSIWKIIFPFLHWVLPNPVYKIDNHEIIEKLEVPQENHPKKISTGTGALGGLVGGVFLANLLRPLANVFNIPSTSLVNLIITIIVLIIALSVFVYVNRRHEKNLTAIVDYTHYPRKKIWIKPPTLKFFFNICFAYLFFMALTVVPLMGFIETGDMFIFVPGVVFLFVSFMITYMTIPPGNTTVRFK |
1 | 5voxR | 0.09 | 0.08 | 3.18 | 1.00 | SPARKS-K | | --MNKESKDDDMSLGKFSFSHFLYYLVLIVVIVYGLYKLFTGHGSDINFGKFLLRTSPYMWANLGIALCVGLSVVGAFITGSSMIGAGVRAPRITTKNLISIIFCEVVAIYGLIIAIVFSSKLTVATAENMYSK-------SNLYTGYSLFWAGITVGASNLICGIAVGITGATAAIILVIEIFLLGLIVGLLMAGKASEFQ--- |
2 | 2bs2C | 0.06 | 0.04 | 1.90 | 0.83 | FFAS-3D | | ----------------------------------------TNESILESYSGVTPERKKSRMPAKLDWWQSATGLFLGLFMIGHMFFVSTLGDNVMIVVSFLAAFVFAVFIAHAFLAMRQYLTFKTHKDLMRHG--------DTTLWWIQAMTGFAMFFLGSVHLYIMMVSEWMWPLYLVLLFAVELHGSVGLYRL---------- |
3 | 3t9nA | 0.10 | 0.05 | 1.98 | 0.25 | HHpred | | -----------------------------------------------------------------------------------------YDIKAVKFLLDVLKILIIAFIGIKFADFLIYRFYKLYSKS-KIQL-PQRKID-TLTSLTKNAVRYIIYFLAGASILKFNIDMTSLLAVAGIGSLAIGFGAQNLVQFSVGDY----- |
4 | 4tkrA | 0.15 | 0.12 | 4.12 | 0.75 | MUSTER | | RLI-ILLEC-----FA-----AVAMVLSFIPLDIGS-SFSIS---LGMIP------------MYVIAIRRGFWAAGFAGLLWGLLHFL-TGKAYILMPSQAIIEYILAFSFIAFSG-VFSKQVRSNLAANQLKKAIEWA----WGTMIIGGVARYFWHYVAGVLFWGAYAFQGWGAQLFSIVMNGASCLGTVLVSG---ISILLK |
5 | 3rkoB | 0.08 | 0.05 | 1.94 | 0.96 | CNFpred | | ---------------------GKSAQLPLQTWLADA--MAGP-------------------TPVSALIHAATMVTAGVYLIARTHGLFL---TPEVLHLVGIVGAVTLLLAGFAALVQ-----------------------TDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILA---------- |
6 | 5a1uD2 | 0.16 | 0.02 | 0.65 | 0.45 | HHsearch-2 | | DRTMYLLGYDNRLYLGDKELNIVSY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
7 | 3mktA2 | 0.10 | 0.08 | 3.08 | 0.84 | Neff-PPAS | | --------------STVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAANVGLMTGLATACITALLTVLFREQIALLYQVVVALAMQLLLFAAIYQCMDAVQVVAAG-------------------SLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWGAKGFWLGFIIGLSAAALMLGQRLYWLQKQSDDV |
8 | 5wggA1 | 0.14 | 0.05 | 1.67 | 0.38 | HHsearch | | MAMIHKFSMMGTNIVVDVNSG---------------AVHVVDDIS-FDILDYYKNFTA-GE--IKNKLADEID-EAL-REIESLEAEGLLFSE---------------------------------------------------------------------------------------------------------------- |
9 | 6nbqF1 | 0.06 | 0.04 | 1.71 | 0.75 | SP3 | | -----------------------------------------------------------YAWLIPVLPLLGALIVGFGLIAFSETTSKLRRPSAIFIMALMAIAMGHSLTLFWSQVQGHLPYTQMIEWAAAGNLHIAMGYVIDPLAALMLVIVTTVAFLVMLYSDGYMAHDPGYVRFFAYLSLFGSSMLGLVVS----------- |
10 | 4ag5A | 0.10 | 0.10 | 3.63 | 0.71 | PROSPECTOR2 | | SSGIVLGKDDGGLVLVDIWKRGGDRTNSEMCRKLGGVWINCTGGEGKINPLQVRLRVFQSPLALHIQTLRTFFSLYLEDALVEVYKEAGITWDTDPRGVPNDKWPTVKELYEYCVKKAEENPLWAGPTAVEADSDFIVFDVHDLQNAEDQVKRAQYFNVLSFAWNILERDRREAIAFLRDTSYGQALLITTLMNLSEGTQRIHIK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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