Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | ETDPLHEPDEETVSHIDLSNMISEEEREELKTELVKLEDEITTLRQVLTAKEKHLVEIKQKLGMNLMNELKQNFSKGWHEVQTTTAYKKTHETLSHAGQKATAAFSNVGTAISKKFGDMRNSPTFKSFEERVETTVTSLKTKVGGTSSGGNFEEVLSSTAHASA |
1 | 4uosA | 0.14 | 0.13 | 4.61 | 0.87 | SPARKS-K | | --GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEILKKAKEMAEKILKMVILKKAKEMAEKILKKVKELEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENEDSEKILKKAKEMAEKILKMVILKKAKEMAEKILKKVKELGV |
2 | 3na7A1 | 0.10 | 0.07 | 2.51 | 0.98 | FFAS-3D | | -----------------------EPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREI-ENLQNEIKRKS--EKQEDLKKEMLELEKLAL------------------------ |
3 | 1av1A | 0.14 | 0.12 | 3.95 | 0.37 | HHpred | | --------------------PYLDDFQKKWQEEMELYRQKVEPLRAELQEGRQKLHELQEKLSP-LGEEMRDRARAHVDALRTHLAYQRLAARLEALKENGGARLAEYHAKATEHLSTLSEKPALEDLRQGLLPVLESFKVSFLSAL--EEYTKKLN------- |
4 | 5cwjA | 0.10 | 0.09 | 3.43 | 0.92 | MUSTER | | DSEEEQERIRRILKEARKSG--TEESLRQAIEDVAQLAKKSQD-SEVLEEAIRVILRIAKESGSEALRQAIRAVAEIAKEAQDSEVLEEAIRVILRIAKESEEALRQAIRAVAEIAKEAQDPRVLEEAIRVIRQIAEES----GSEEARRQAERAEEEIRRRAQ |
5 | 4k1pA | 0.14 | 0.10 | 3.34 | 0.61 | CNFpred | | -------------------------QTREAALRIQQKQKELLPLIQKLSQTEAEATQITFV--EDQVSSFTELIDRQITTLETLTDWKVLNNNMIQIQKNVEEGTYTDSSLLQKHFNQIKVSDEMNKQTNQFEDYVTNVEVH---------------------- |
6 | 3he5A | 0.19 | 0.05 | 1.77 | 0.40 | HHsearch-2 | | -----------------------SNLVAQLENEVASLENENETLKKKNLHKKDLIAYLEKE-----IANLRKKIE----------------------------------------------------------------------------------------- |
7 | 4cgkA1 | 0.14 | 0.14 | 4.77 | 0.90 | Neff-PPAS | | --SNLTAQQQEAQKQVDQIQSAIQAEQSNLQAENDRLQAESKKLEGEITELSKNIVSRNQSLELEQQKADKKAISEKQVANNDAINTVIANQQKLADDAQALTTKQAELKAAELSLAAEKATGEKASLLEQKAAAEAEARAAAVAEAAYKEKRASQQQSVLASA |
8 | 3qh9A | 0.17 | 0.07 | 2.20 | 0.64 | HHsearch | | -QEEKQRKAEELLQELRLKIKVLENERNQYEWKLKATKAEVAQLQEQVALKDAEIERLHSQLSR---------------------------------------------------------------------------------------------------- |
9 | 5cwjA | 0.10 | 0.09 | 3.43 | 0.70 | SP3 | | DSEEEQERIRRILKEARKSG--TEESLRQAIEDVAQLAKKSQD-SEVLEEAIRVILRIAKESGSEALRQAIRAVAEIAKEAQDSEVLEEAIRVILRIAKESEEALRQAIRAVAEIAKEAQDPRVLEEAIRVIRQIAEESGSEEARRQAERAEEEIRRRAQ---- |
10 | 5nnvA | 0.09 | 0.09 | 3.26 | 0.78 | PROSPECTOR2 | | AKEEELAESSAISAK--------EAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLARLKKELTETELALKEAKEDLSFLTSESSSTSGEEKQKTTLL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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