Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MQPENPMIYITKIVILYACNLKFPVKLHGKLLNLALLVLNSLFSLNMVSTLEVYALITSGKQMLLTFLNLDVLNMFMFLLTLFPIFSWPPFTLENQHVTVFNICCFAFLLQESHKPLKQIMDLVILAVLFNVFVFLSKFIIKQEFLIIHRDKVL |
1 | 5mqfT | 0.09 | 0.09 | 3.45 | 0.68 | SPARKS-K | | ENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQEVLCLEMLTLLLERPTDDSEVAIGFLKECGLKLTQVSPRGINAIFERLRNILHDKRVQYMIEVMFAVRKDINLVSFRR |
2 | 5e1jA | 0.14 | 0.13 | 4.43 | 0.74 | FFAS-3D | | ------AILLVHTFFISYEGSRIFWTSRLNLVKVACVVILDFLYFRIAPYVRVIIFILSIRELRDTLVLLNILALWMLFLLFASWIAFVMFEDTQQGLTVYGATLYQMFILFTTSNNPDVWIPAYSSVFFVLYVLIGVYFVTNLILAV------ |
3 | 3jacA | 0.20 | 0.16 | 4.99 | 0.40 | HHpred | | --SQNQLWYFVKCIYFSAYQIRYPTRILGNFLTKKYN------HLNLFL-FQGFRLVPF-------LVELRAVMDWVWTDTTLSLSNW--MCVEDIYANIFIIKCSRETEKKYPQPVKYGMGGLIILFLIAIIWFMSLI--------------- |
4 | 6eznF | 0.13 | 0.12 | 4.27 | 0.69 | MUSTER | | GGTLYPGLMTTSAFIWHALRNWLGLPID---IRNVCVLFAPLFSGVTAWAT--YEFTKE-----IKDASAGLLAAGFIAIVPGYISRSVAGSYDNEIAITLLMVTFMFWIKAQKTGIMHATCAALFYFYMVSYVFITNLIPLHVFLLILMGRYS |
5 | 3rkoB | 0.11 | 0.10 | 3.50 | 0.77 | CNFpred | | ------LMLLGGAVGKSAQQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKR-VLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVILAC---------- |
6 | 3jacA | 0.17 | 0.17 | 5.53 | 0.99 | HHsearch-2 | | MLVIDRALYLRKTVLGKAFQVVLVVAIHIWMFFILPAVTERMFSQNAVAQVKCIYFALSAYQIRCGYPELRAVMDWVWTDTTLSLSNW--MCVEDIYANIFIIKCSRETEKKYPQPVKYGMGGLIILFLIAI--IWFPLLFMSLIRSVVVNQPI |
7 | 5kbwA | 0.09 | 0.08 | 3.25 | 0.61 | Neff-PPAS | | ----SSIKKISFVGIFSALATFLKYDPSEIPALIVSFLLGPGVGMFVVLVKDILFFLMKSGDPVGIAMNAVLGMSFVGIAGLIYHRNKSRATATLFATAFALGLNALIVPLYFEAPFELYLKFFPFILAFNLVKFGIDSVVTFFVYKKVSSIL- |
8 | 2pfvA5 | 0.24 | 0.10 | 3.23 | 0.32 | HHsearch | | IKPFDPQINITK-------KMPFPYYEDQQLGALSWI--LDYFHGNGSIIQDILVGERS-KLILKCMAFLEPFAK-------------E----------------------------------------------------------------- |
9 | 4d5rA | 0.19 | 0.17 | 5.44 | 0.51 | SP3 | | SDMHTELASISQLVIAKIETID-NDILNKDIVNFIMSNLDNPF----ISFLDTVYTIIDQENYQTELINLDDNEIIDCIVNKFMSFY-----KDNLENIVDAIITLKYIMNNPDVLGSRIADIDIKQVIRENILQLSNDIRER-YLG------- |
10 | 2x3mA | 0.09 | 0.09 | 3.42 | 0.60 | PROSPECTOR2 | | TTPNASEKKMEFMYWYTRTYLEEAKDIRPDIADALARGMAGLAF----GRTDWVASMLDPQIMRHIYTDPEVARIYSETRDMLRRVSDYYISLTTMELGKV-ADIIAEAKAKGENPEVVAREIAEAKSLYFNLYYIGRSIGDNYVLEVARVSKM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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